Prodigiosinella aquatilis: PCO85_16445
Help
Entry
PCO85_16445 CDS
T09220
Symbol
der
Name
(GenBank) ribosome biogenesis GTPase Der
KO
K03977
GTPase
Organism
prod
Prodigiosinella aquatilis
Brite
KEGG Orthology (KO) [BR:
prod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
prod03009
]
PCO85_16445 (der)
Ribosome biogenesis [BR:
prod03009
]
Prokaryotic type
GTPases
PCO85_16445 (der)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
FeoB_N
KH_dom-like
GTP_EFTU
Dynamin_N
RsgA_GTPase
AIG1
cobW
AAA_22
Ras
Roc
AAA_24
NTPase_1
TniB
SRP54
Motif
Other DBs
NCBI-ProteinID:
WJV52794
LinkDB
All DBs
Position
complement(3530671..3532161)
Genome browser
AA seq
496 aa
AA seq
DB search
MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGNEFIAIDTGGI
DGSEEGVETRMAGQSLQAIEEADIVLFMVDARDGLMPADRGIAQHLRSREKPTFLVANKI
DGIDADTGIADFYSLGLGEVYPIAASHGRGVTSLLEKALLPFIGEAPEPKELTEEEANAA
YWAEQLAEQQSDSENSEPKDDFDPESLPIKLAIVGRPNVGKSTLTNRILGEDRVVVYDMP
GTTRDSIYIPMERDGREYVLIDTAGVRKRGKITETVEKFSVIKTLQAIEDANVVLLVIDA
REGISDQDLSLLGFILNAGRSLVIVVNKWDGLSQEVKDQVKETLDMRLGFIDFARIHFIS
ALHGSGVGNLFESVTEAYTCSTRRVGTSMLTRIMQMAADDHQPPLVRGRRVKLKYAHAGG
YNPPIVVIHGNQVKDLPDSYKRYLMNYYRRSLDVMGTPIRIQFKEGENPFADKRNTLTPN
QLRKRKRLIQHIKKGK
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgatacctgtcgtcgcgctggtcgggcgcccgaatgtgggtaaatccacgctgtttaac
cgcttgacgcgtacccgtgatgcattggtggcggatttccctgggctgacgcgtgaccgc
aagtatggtcgtgctgaggtagaagggaatgaatttattgccattgataccggaggcatc
gatggtagtgaggaaggagtggaaacacgtatggcaggccaatcactgcaagctatcgaa
gaggccgatattgtcctgttcatggtagatgcccgtgatggtttaatgccggcagatcgc
ggcatcgcccagcatctgcgcagtcgtgaaaagcccaccttcctggttgccaacaaaatt
gacgggattgatgcggatacgggtattgccgatttttactcattgggattaggtgaagtg
taccctatcgcagcatctcacggtcgaggtgtcacttcattgctggaaaaggctctactg
ccttttattggtgaggcacctgaaccgaaagaactgacggaagaagaggctaatgcggcc
tattgggcggagcaattggctgagcagcagtccgatagcgaaaatagcgaaccaaaggat
gatttcgatcccgaatcattacccattaaactggctattgtcgggcggcccaatgttggt
aagtccacgcttaccaatcggattttgggtgaagatcgtgtggtggtttacgatatgccg
ggaaccacccgggacagtatctatatcccaatggaacgtgacggccgtgaatatgtcttg
atcgatactgccggagtccgtaagcgtgggaaaataaccgagacggtagagaagttttcg
gtcattaaaactctacaggcgattgaagatgcgaatgtagtcctgttggtgattgatgcc
cgggaaggtatttctgatcaggatctctcgctgctgggctttattctcaatgctggccgt
tctctggtgattgtggtcaataaatgggatgggctgtcacaggaagtaaaagatcaggtg
aaagaaacactggatatgcgcctgggctttattgattttgctcgtatccatttcatttcc
gctttgcatggcagtggtgtcggtaatctgtttgagtcagtcactgaagcttatacatgc
tctactcgtcgggtgggaacttccatgctgacccgtatcatgcagatggcggcagatgac
catcaaccaccgttggtgcgtggtcgccgagtaaaactgaaatatgcacatgccggtggc
tataatccaccgattgtcgttattcacggcaatcaggtaaaagatctgccggattcctat
aaacgctacctgatgaattattaccgtcgttcactggatgttatgggaacaccaatccgc
attcagttcaaagaaggtgagaatccctttgcggataagcgcaacacattgacgccaaat
cagctccgcaagcgcaagcgtttgatacagcacatcaagaaaggtaagtaa
DBGET
integrated database retrieval system
