Prodigiosinella aquatilis: PCO85_16590
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Entry
PCO85_16590 CDS
T09220
Name
(GenBank) polysaccharide lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
prod
Prodigiosinella aquatilis
Pathway
prod00040
Pentose and glucuronate interconversions
prod01100
Metabolic pathways
prod02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
prod00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
PCO85_16590
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PCO85_16590
Enzymes [BR:
prod01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
PCO85_16590
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Ortholog
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GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
WJV52822
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Position
3559638..3560846
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AA seq
402 aa
AA seq
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MNNTSMTSVSKMKATGCSSFSCGLLTTSKHLLATMITAAVMVSSANAASVLTSEALTTAP
SAGWASQSGSTTGGAKASSSNIYTAKNISEFKTALSKGSTAKIIQITSPIDISGGTAYTS
SSDQKSRSQLSIPSNTTIIGIGSKGKFTNGSLIIKGVSNVIVRNIYIQTPIDIAPKYEDG
DGWNAEWDAMNIDNSDHVWVDHVTITDGSFTDDQYTTKNGETYVQHDGSLDIKKGADYIT
VSNSRFELHDKTILIGHSDSNASQDKGKLHVTFFNNVFDRVTERTPRVRFGNIHAFNNVY
LGDKKHAVYPYLYSFGIGTSGSLLSEKNGFNISNLTDKCKIVKNFNGTIFSDKGSIFNGS
SVELSSCGFSAYTSKIPYSYTAKTMTTSLMTTINNNAGYGKL
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacacgagtatgacttccgtttctaaaatgaaagctacaggatgttcctctttt
tcctgtggcctgcttaccacttcaaaacatttgctggctaccatgatcacagccgccgta
atggtatcaagcgcaaatgcagccagcgttcttaccagcgaagcccttactacagcgcct
tccgctggttgggcatctcagagtggttctaccaccggaggtgccaaagccagttcatcc
aatatctataccgccaaaaatatctctgaattcaaaaccgcactgtcaaaaggcagtacg
gccaaaatcatccagattaccagcccaattgatatcagtgggggcacagcctacaccagc
tcatcagatcagaaatcccgcagccaactcagcatcccctccaataccactatcatcggt
attggcagcaaaggcaaattcaccaatggttcgttaattatcaaaggcgtcagcaacgtt
atcgtacgtaacatctatatccaaacgccgatcgatatcgcgccgaaatatgaagatggt
gatggctggaatgctgaatgggatgccatgaacattgataactccgatcatgtatgggtt
gaccatgtcactattactgatggcagctttacagatgatcaatatacgacgaaaaacggc
gaaacctatgtgcagcacgatggttcactggatatcaaaaaaggggccgactacatcacc
gtatccaatagccgctttgaattacacgacaaaaccattctgattggccacagcgatagc
aacgcctcacaggataagggaaaactgcacgttaccttctttaacaacgtgtttgaccgt
gtgactgagcgtaccccacgcgttcgcttcgggaatatccatgcattcaacaacgtctat
ttaggggacaaaaaacacgcagtctacccttatctctatagcttcggcatcggtaccagt
ggcagtctgctttctgaaaaaaatggatttaatatcagtaacctcactgataaatgcaag
attgtaaaaaactttaatggcaccattttctcagataaaggttctatctttaacggcagc
tcagtcgagctgtccagctgtggattcagcgcctacacatcgaaaattccttacagctat
acggcgaaaacgatgaccaccagtttgatgacgaccatcaacaataatgccggatacggt
aaattataa
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