KEGG   Prodigiosinella aquatilis: PCO85_16715
Entry
PCO85_16715       CDS       T09220                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
prod  Prodigiosinella aquatilis
Pathway
prod03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:prod00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    PCO85_16715 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:prod03019]
    PCO85_16715 (rnc)
   03009 Ribosome biogenesis [BR:prod03009]
    PCO85_16715 (rnc)
   03036 Chromosome and associated proteins [BR:prod03036]
    PCO85_16715 (rnc)
Enzymes [BR:prod01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     PCO85_16715 (rnc)
Messenger RNA biogenesis [BR:prod03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     PCO85_16715 (rnc)
Ribosome biogenesis [BR:prod03009]
 Eukaryotic type
  90S particles
   RNase
    PCO85_16715 (rnc)
 Prokaryotic type
  rRNA processing factors
   PCO85_16715 (rnc)
Chromosome and associated proteins [BR:prod03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     PCO85_16715 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DSRM_2 RM44_endonuclase DND1_DSRM
Other DBs
NCBI-ProteinID: WJV52846
LinkDB
Position
complement(3605428..3606108)
AA seq 226 aa
MNPILINRLQKKLGYTFQQYDLLLQALTHRSASSKHNERLEFLGDSILSFVIANALYHRF
PRIDEGDMSRMRATLVRGNTLAEIAREFELGECLRLGPGELKSGGFRRESILADTVEALI
GGIFLDSSIQMIEQLILQWYQTRLDEISPGDKQKDPKTRLQEFLQGRHLPLPTYLVVQVR
GEAHDQEFTIHCQVSGFSEPVVGTGSSRRKAEQAAAEQALKKLEIE
NT seq 681 nt   +upstreamnt  +downstreamnt
atgaaccccatcctcataaatcgtttacaaaaaaaactaggctatactttccaacaatat
gacttgttattgcaggcgttgactcaccgtagcgccagtagcaaacataatgaacggctg
gaattccttggggattctatcctgagttttgttattgccaatgcgctttatcatcgtttc
cctcgtatagatgaaggggatatgagtcggatgcgggcaacattggtacgtggtaataca
ctggcggagattgccagggaatttgaattgggcgaatgcctgcgtttaggccctggagaa
ttaaaaagcggtggtttccggcgtgaatccattcttgccgatacggttgaggcactgatc
ggtggtatattcctggacagcagtatccagatgatagaacaattgattcttcaatggtat
cagacccgtttggatgaaatcagtccaggtgataaacagaaagatcccaagacccggtta
caagagtttttgcagggacggcatttgccactaccgacctatctggttgtgcaggtacgt
ggtgaagcacatgatcaggaattcaccattcattgtcaggtgagtgggtttagcgagccg
gtggttggcaccggttcaagccgccgaaaggctgaacaggctgcggcagagcaagcgttg
aaaaagctggagattgaatga

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