Prodigiosinella aquatilis: PCO85_16900
Help
Entry
PCO85_16900 CDS
T09220
Name
(GenBank) CdaR family transcriptional regulator
KO
K02647
carbohydrate diacid regulator
Organism
prod
Prodigiosinella aquatilis
Brite
KEGG Orthology (KO) [BR:
prod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
prod03000
]
PCO85_16900
Transcription factors [BR:
prod03000
]
Prokaryotic type
Helix-turn-helix
Other families
PCO85_16900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Diacid_rec
HTH_30
GGDEF_2
GAF
GAF_2
Motif
Other DBs
NCBI-ProteinID:
WJV52873
LinkDB
All DBs
Position
complement(3638228..3639385)
Genome browser
AA seq
385 aa
AA seq
DB search
MATYHLNASLAQDIVARTMQIIDSNINVMDARGRIIGSGDQDRVGELHEGALLVLSQGRV
VDIDEAVARHLHGVRPGINLPLRIDGEIVGVIGLTGNPGQLRQYGELVCMAAEMMLEQAR
LLHILAQDSRLREELVLNLIRTDELSPALMEWAQRLGIDLNQPRVVAVVEVDSGQLGVDS
AMDELQQLQTLLTTPERNNLIAIVSLTEMVVLKPALNSYGRWDAEEHRRRIDNLLSRMAD
GSRLRVRLALGNYFSGPGSIARSYRTARTTMSVGKQRMPAQRSYFYQDLILPVLLDSLRG
GWQANELVRPLTKLKAMDGNGLLRRTLHAWFRNNVQPGVTAKALFIHRNTLEYRLNRISE
LTGLDLTNFDDRLLLYIALQLDEDE
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggcgacctatcatcttaatgccagtctggcacaggatatagttgcacgtactatgcaa
attattgatagtaatatcaatgtgatggatgcgcggggtcgaatcattggcagtggtgac
caggatcgtgttggtgagctacatgaaggcgcattgttggtgctttctcaagggcgggtc
gtcgacattgatgaagcggttgcccgtcacctgcatggtgtacggccgggcatcaatctg
ccactgaggatagacggagaaatcgtgggcgttatcggtctgaccggtaatcccgggcag
ttgcgccagtacggtgaactggtgtgcatggctgccgagatgatgctggagcaggcgcgt
ttgctgcatattctggcacaggatagtcgtctgcgcgaagagctggtattgaacctgatc
cggactgacgagttgtcaccggcgctgatggaatgggcgcaacgattggggatcgatctt
aatcagccacgtgtggtagcggtagtggaagtcgatagtggacaactgggtgtggatagc
gccatggatgagcttcagcagttacaaactctactgacgacgccggagcgcaacaacctg
attgctattgtgtcactgacagaaatggtggtgttgaaacctgcacttaatagttatggg
cgttgggatgcggaggaacatcgtcggcgcattgataatttgctttcccgtatggcagat
ggcagtcgcttacgggtccggttggcgctggggaattatttttccggtcctggcagtatc
gcgcgttcttatcgtaccgcacggactacgatgagtgttggcaagcagcgtatgccggct
caacgcagctatttttatcaggatctgatattgcccgtattgctggatagcttgcgtggt
ggctggcaggctaatgagctggttcgcccgttgaccaagctcaaagcaatggatggaaat
ggcctattacgccggacattacatgcctggtttcgtaataatgtgcagcccggagtgaca
gccaaggcgctgtttattcatcgtaatacactggaataccgtttgaatcgtatctcggaa
ctgactgggctggatttgaccaactttgatgatcggctgctgttatatatagcgcttcaa
ttggatgaagatgaatag
DBGET
integrated database retrieval system
