Prodigiosinella aquatilis: PCO85_17065
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Entry
PCO85_17065 CDS
T09220
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
prod
Prodigiosinella aquatilis
Pathway
prod03030
DNA replication
prod03430
Mismatch repair
prod03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
prod00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PCO85_17065 (dnaQ)
03430 Mismatch repair
PCO85_17065 (dnaQ)
03440 Homologous recombination
PCO85_17065 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
prod03032
]
PCO85_17065 (dnaQ)
03400 DNA repair and recombination proteins [BR:
prod03400
]
PCO85_17065 (dnaQ)
Enzymes [BR:
prod01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PCO85_17065 (dnaQ)
DNA replication proteins [BR:
prod03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PCO85_17065 (dnaQ)
DNA repair and recombination proteins [BR:
prod03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PCO85_17065 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
WJV52900
LinkDB
All DBs
Position
complement(3669396..3670130)
Genome browser
AA seq
244 aa
AA seq
DB search
MSTVITRQIVLDTETTGMNKLGVHYEGHRIIEIGAVEVINRRLTGRHFHVYTRPDRLVDP
EAYNIHGISDEFLANKPSYADVTDDFLAFIRGAELVIHNAMFDIGFMDYEFRMLNRNIPK
TETFCKITDSLLMARKLFPGKRNNLDALCDRYLIDNSKRTLHGALLDAEILAEVYLAMTG
GQTSLSFSMEGESQRQGDASEAIQRIARPTSSLSVVYANAEELQAHEKRLDLIVKKGGSC
LWRN
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgagcactgtaattacgcgacaaatcgttctggatactgaaaccacgggtatgaacaaa
ctgggggttcactatgaaggacatcgtattatcgagattggggcggtagaggtgattaac
cggcgtcttaccgggcgtcattttcatgtctacacccggcctgatcgtttggtcgatccg
gaagcctataacattcatggcattagtgatgagttcctggcaaataaacccagttatgcc
gatgtcactgatgattttctggcgtttatccgcggagctgagctggtcattcataatgcg
atgtttgatatcggttttatggattatgaattccgcatgttgaaccgcaatattcccaaa
acagaaacgttttgtaagattactgatagcctgttgatggcgcgcaagctattccccggc
aagcgcaataatctggatgccttatgtgaccgttatctgatagataacagtaaacgaacg
ctgcatggcgcattacttgatgccgaaattttggctgaagtttatctggccatgacgggt
ggacaaacgtcgttgtcgttttcaatggaaggagaaagtcaacgacaaggggatgcaagc
gaagccatccagagaatcgcaagacctacgtcgtcgttaagcgtggtttatgccaatgcg
gaagagctacaggcgcatgaaaaacgattggatttgattgtgaaaaaaggtggcagctgt
ttatggcggaattaa
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