Prodigiosinella aquatilis: PCO85_18280
Help
Entry
PCO85_18280 CDS
T09220
Symbol
garD
Name
(GenBank) galactarate dehydratase
KO
K01708
galactarate dehydratase [EC:
4.2.1.42
]
Organism
prod
Prodigiosinella aquatilis
Pathway
prod00053
Ascorbate and aldarate metabolism
prod01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
prod00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00053 Ascorbate and aldarate metabolism
PCO85_18280 (garD)
Enzymes [BR:
prod01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.42 galactarate dehydratase
PCO85_18280 (garD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GD_AH_C
GD_AH_second
SAF_GD_AH
Motif
Other DBs
NCBI-ProteinID:
WJV53113
LinkDB
All DBs
Position
3922102..3923676
Genome browser
AA seq
524 aa
AA seq
DB search
MSDHTRENAAQEQPLYIKVHESDNVAIVVNNNGLRIGTRFNNGLELIEHIPQGHKVALVD
IAASDPIIRYGEIIGYALRDILQGSWIDESLVALPKAPALETLPLATKVPPPLPPLEGYT
FEGYRNPDGSVGTKNLLGITTSVHCVAGVVDYVVKIIERDLLPKYPNVEGVVALNHLYGC
GVAINAPAAIVPIRTIHNLALNPNFGGEVMIIGLGCEKLQPERLLEGTPDVQPISPDDTS
IVRLQDESHVGFRSMVDDILTMADKHLQRLNRRRRETVPASELVVGTQCGGSDAFSGVTA
NPAVGFASDLLVRCGATVMFSEVTEVRDAIHLLTPRAINVDVGKRLLEEMAWYDNYLDNG
QTDRSANPSPGNKKGGLANVVEKALGSIAKSGTSPIMEVLSPGQRPTKRGLIYAATPASD
FVCGTQQLASGITVQVFTTGRGTPYGLLAVPVIKMATRTALANRWHDLMDIDAGTIATGE
ATIEDVGWQLFHFILDIASGRKKTWSDQWGLHNALAVFNPAPVT
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatcacaccagagaaaacgcagctcaagagcagccactttatataaaagttcat
gagtctgataatgttgccattgtggttaataataatggcttacgcatcggtacccgtttt
aataacggattggaattgattgaacatattccacagggacataaagtcgcgctggtagat
attgccgcatcagatccgattatccgttacggtgaaattattggctatgcattgcgggat
atacttcagggaagttggatcgatgagtcattggtcgcattgccaaaggctccggcgttg
gaaacgctaccgctggcaaccaaagttccccctccattgccgccgctagaagggtatacc
tttgaaggttaccgtaatcctgatggcagtgtcggtaccaaaaatttgttaggtatcacc
actagcgtacattgtgtggctggcgtcgttgattatgtggtgaagattattgaacgcgat
ctattacccaaatatccaaacgtagagggtgtagtcgcactgaatcatctatatggctgt
ggtgtggccatcaatgctccagcagcgattgtaccgatccgtaccatccacaatctggca
cttaaccccaatttcggcggtgaagtcatgattatcggactgggttgtgaaaaactgcaa
cctgagcgtctgctggaaggaacgccggatgtgcagcccatatcaccagatgataccagt
atcgtgcgcttgcaggatgaatctcacgtaggattcagatctatggtggatgacatcctg
accatggcggataaacatttgcaacgcctcaatcggcgccgtcgggaaactgtaccggct
tccgaactggtggttggcacgcagtgcggtggcagcgatgccttctccggcgtaaccgcc
aacccagcagtaggatttgcgtctgatctgctggtccgttgtggtgccactgtgatgttc
tccgaagtcaccgaagtacgtgatgccatccatttgctgacgccacgcgctattaatgtg
gacgttggcaaacgtctgctggaagagatggcctggtacgacaattacctggataacggg
cagacagatcgcagtgccaacccgtcgcctggtaataaaaaaggggggctggcaaatgtg
gtggaaaaagcgctcggttcgattgccaaatcaggcaccagcccgattatggaagtgctg
tcaccgggtcagcgccccacgaaacgaggcctgatttacgccgcgacacctgccagcgat
ttcgtctgtggtacacagcaactcgcatccggaattaccgtgcaggtatttactaccggt
cgcggtacgccttatggactgcttgcggttccggtaatcaaaatggcgacccgtacagca
ctggccaaccgctggcatgatctcatggatattgatgctggtactattgccactggcgaa
gctactattgaagacgtcggctggcagttgttccactttatcctggatatcgccagtggt
agaaagaaaacgtggtctgatcaatgggggctgcataatgctttagcggttttcaacccg
gcgccagtaacctga
DBGET
integrated database retrieval system
