Prodigiosinella aquatilis: PCO85_18770
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Entry
PCO85_18770 CDS
T09220
Name
(GenBank) extracellular solute-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
prod
Prodigiosinella aquatilis
Pathway
prod02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
prod00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PCO85_18770
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
prod02000
]
PCO85_18770
Transporters [BR:
prod02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
PCO85_18770
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_6
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
WJV56139
LinkDB
All DBs
Position
complement(4023549..4024607)
Genome browser
AA seq
352 aa
AA seq
DB search
MRKLLSSVLISTALLSSYSAMAADNLSALEKAARAEGQVNSVGMPDSWANWKETWNDLST
KYGLKHSDTDMSSAEEIAKFIAEKNNASADIGDVGVAFGPIAVQKGITQPYKPSTWSQIP
AWAKDKDGNWAVAYTGSIAFIIDKQQVKNIPHSWADLLKGKYTVNIGDVGAASQAANGVL
AANYALGGNESNLKPALAFFAKLAKEGRLGLANPGLANIEKGEVQVGVIWDFNALNYRDK
IDKSRFEVLIPSDGSVISGYTTIINKYAKHPNAAKLTREYIFSDAGQINLARGYARPIRA
KYITLPEDVKAKLLPDAEYKNVHPVMNAAAWEKSVKALPRQWQENVIINMKQ
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaattattgtcttccgtactaatcagtacggcgttgctttcctcgtattctgcc
atggcggcggataatttgtctgcgctggaaaaagcggcccgagcggaaggacaggttaac
agcgtcggtatgccggacagctgggccaattggaaagagacctggaatgatttatcaacc
aaatacgggttgaaacacagtgataccgatatgtcttccgcagaagagatcgccaagttt
atcgcggagaaaaacaatgccagtgcagacatcggcgacgttggcgtagcgtttgggccg
atagcggtacagaagggcatcacccaaccgtataaacccagcacctggagtcagataccg
gcctgggccaaggataaagacggaaactgggctgtggcctacaccggttctatcgctttc
atcatcgacaaacagcaggtgaagaatattccacacagctgggccgatctgttgaaaggc
aaatacacggtcaacattggtgatgtgggggcagcttcccaagcggcgaacggcgttctg
gcagccaattatgcgctgggtggtaatgaatccaacctcaagccagcactggctttcttt
gccaaactggccaaagaaggacgtctgggtttagccaatccggggcttgccaatatcgaa
aaaggggaagtgcaggttggcgtgatatgggactttaatgcgctgaactaccgagacaag
attgataaaagccgttttgaagtgctgatcccgtctgatggttcggttatttccggttat
accacgattatcaacaagtatgccaaacacccgaatgccgccaaactgacccgtgaatat
atcttctctgatgctggtcaaatcaatctggcccgtggttatgctcgcccgattcgtgcc
aagtacataacgttgcctgaagatgtgaaagccaaattgttgccggatgcggaatacaag
aatgtacatccagtgatgaatgctgccgcatgggagaagagcgtcaaagcgttgccgcgt
cagtggcaggaaaatgtcatcatcaatatgaaacagtaa
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