Prodigiosinella aquatilis: PCO85_19495
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Entry
PCO85_19495 CDS
T09220
Symbol
sgrR
Name
(GenBank) HTH-type transcriptional regulator SgrR
KO
K11925
SgrR family transcriptional regulator
Organism
prod
Prodigiosinella aquatilis
Brite
KEGG Orthology (KO) [BR:
prod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
prod03000
]
PCO85_19495 (sgrR)
Transcription factors [BR:
prod03000
]
Prokaryotic type
Helix-turn-helix
Other families
PCO85_19495 (sgrR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SgrR_N
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
WJV53321
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Position
4177232..4178890
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AA seq
552 aa
AA seq
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MSSTRLQQQFIRLWQCFQGQTTETTLQELTGVLSCSRRHIRSLLGAMQKQGWLIWHAEVG
RGKRSKLTFLYTGLALQQQRAEDLLEQDRIDQLVQLVGDKETLRQMLLSHLGRSFRQGKH
LLRIAYYRPMRNLLPGTALRRSEMHIARQIFSGLTNINEENGELQPDLAHHWQQISPLHW
RFYLRPAVRFHHGREMTMDDIVTSLSRLTSLPLFTHIDNIISPTPFVIDIRLHSTDVWLP
WLLGSASAMIVPQEWQTLPDFAHQPIGTGPYAVVRNSHSQLKITAFDDYFGYRALIDEVS
IWVLPDTPEVISCAVQLQNDDSPNNKLENRLEEGCYFLLFDHRSSLTSSLEIRRWLCQVL
SPVAILNQANGLYQSNWSPAYGLLPRWHHSQLSLLQDKPQGLRQLTVTFYREHLEYQDLS
AIMQKLLAQHGVTLNVQIVDYDDWYQGNGTSDIWLGSANFYLPLEFSLFAMLYELPLLQH
CLDEDLTQDAKRWREGSLSPTEWSQMRVINHQIHPLFHHWLQLQGKRSMRGIRMNTLGWF
DFKSAWFVPPEN
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccactcgcctgcaacaacagttcatcaggttatggcaatgctttcagggacaa
actactgaaactaccctgcaggagttaaccggggttttgagctgctcacgccgccacatt
cgatccctgctgggcgccatgcaaaaacagggttggttaatctggcacgctgaagtcggt
cgggggaaacggtcaaaactcacgttcctctatactggcctggcgctgcaacagcaacgg
gcggaagacctgctggagcaggatcgtatcgatcagttggtgcaactggtgggcgataag
gagaccttacgacaaatgctgttgtcacatctgggtcgcagcttccgtcaaggcaagcat
ttactacgtatcgcttattaccgcccgatgcgcaatctgctgcctggtaccgccttgcga
cgttcagaaatgcatatagcccgccagattttcagcggattgaccaacataaatgaggaa
aatggggaactacaaccggatctagcccaccactggcagcaaatttcaccgttgcactgg
cggttttatttacgcccggcggtccgtttccaccacggccgcgagatgaccatggacgat
atcgtgacgtctttgagtcggttaacctcactgcccttgtttactcacatcgacaacatc
atatctcccacgccttttgtgatcgatattcgactgcatagcactgatgtctggctgccg
tggttactgggcagcgcttcagccatgattgtgccgcaggagtggcaaacactgccggat
tttgctcatcagcctattggtaccggcccctatgccgtggtgcgcaatagtcatagtcag
ttgaaaatcaccgcctttgacgactattttggttaccgcgccctaattgatgaagtcagt
atctgggtattgccggatacacctgaggtgatttcctgtgcagttcagttacaaaacgac
gactctccgaacaacaaactggaaaatcggctggaagaagggtgctactttctgctgttc
gaccatcgctcttccctgacgtcatcactggaaattcgccgctggctatgtcaggtactc
agcccggtagccatactcaatcaagccaatgggctttatcagagtaattggtcacccgct
tacggactgttgccacgctggcaccatagtcaacttagcctgttacaggacaagcctcag
ggactgagacaactgacggtgacgttctaccgtgaacatctggaatatcaggatctcagt
gccattatgcagaaactgctggcacaacatggtgtcacgttaaacgtccaaatcgtcgat
tatgacgattggtatcaaggcaatggtaccagtgatatctggctcggcagcgccaatttc
tatctgccactggagttttccttgttcgccatgctgtatgaactccccttattacaacac
tgcctggatgaggatttgacgcaagatgcaaaacgctggcgggaaggttctctgtcaccc
acggagtggagccaaatgcgggtgataaaccaccagattcatccgctgttccaccactgg
ctacagttacaagggaaacgcagtatgcgtggtattcgtatgaatacgctgggatggttt
gatttcaaatccgcctggtttgtgccgccagaaaactga
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