KEGG   Prodigiosinella aquatilis: PCO85_21435
Entry
PCO85_21435       CDS       T09220                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
prod  Prodigiosinella aquatilis
Pathway
prod00300  Lysine biosynthesis
prod00470  D-Amino acid metabolism
prod01100  Metabolic pathways
prod01110  Biosynthesis of secondary metabolites
prod01120  Microbial metabolism in diverse environments
prod01230  Biosynthesis of amino acids
Module
prod_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:prod00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    PCO85_21435 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    PCO85_21435 (dapF)
Enzymes [BR:prod01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     PCO85_21435 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF AAA_2
Other DBs
NCBI-ProteinID: WJV53669
LinkDB
Position
complement(4600203..4601027)
AA seq 274 aa
MQFAKMHGLGNDFMVVDAVTQNVYFSPELIRRLSDRHYGVGFDQLLVVEPPYDPELDFHY
RIFNADGSEVTQCGNGARCFARFVRLKGLTNKRDISVSTQTGRMILSVTDDELVRVNMGE
PNFEPQQVPFRAVKAEKTYIMRAEEHTVLCGVVSMGNPHCVIQVDDVDTAKVDVLGPLLE
SHERFPERANIGFMQVVDDHTIRLRVYERGVGETQACGSGACGAVAVGIQQGLLADNVKV
KLTGGELDINWAGPGKPLFMTGPATHVYDGSIHL
NT seq 825 nt   +upstreamnt  +downstreamnt
atgcagttcgccaaaatgcacggtttgggcaatgactttatggttgttgatgccgttacg
cagaatgtctatttttcacctgagttgattcgacgtttgtcggatcggcattatggtgtt
ggctttgatcaactgctggtggttgagccaccttacgatcctgaactggattttcattac
cgtattttcaatgcagatggtagtgaagtgactcagtgtggtaatggtgcccgttgtttt
gcccgatttgtgcggcttaagggattaactaacaaacgagatatcagtgtcagtacccag
actgggcgtatgattctgagcgttacggatgatgaactggtgcgagtcaatatgggtgaa
cccaattttgagccgcagcaggtccctttccgcgcagttaaagcggaaaaaacgtatatt
atgcgagcagaagaacataccgtactgtgtggtgtagtttcgatggggaatccccattgt
gtgatacaggtggatgatgtggatactgcgaaggtcgatgtgttgggaccgctgctggag
agccatgagcgttttccggaacgtgccaacattgggtttatgcaggttgtggatgaccac
actatccgattgcgtgtctatgaacgcggcgtgggagaaactcaagcttgcggtagtgga
gcctgtggggctgttgcggtgggtattcagcaagggctgctggccgacaatgttaaggtt
aaattgactggcggtgagcttgatattaactgggcaggtccaggtaagccgttatttatg
actgggccagctacgcacgtttacgatggatccattcatttatga

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