Prodigiosinella aquatilis: PCO85_21890
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Entry
PCO85_21890 CDS
T09220
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
prod
Prodigiosinella aquatilis
Pathway
prod03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
prod00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PCO85_21890 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prod03400
]
PCO85_21890 (priA)
Enzymes [BR:
prod01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PCO85_21890 (priA)
DNA repair and recombination proteins [BR:
prod03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PCO85_21890 (priA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WHD_PriA
PriA_3primeBD
DEAD
ResIII
Helicase_C
PriA_C
Zn_ribbon_PriA
TrwB_AAD_bind
Zn_ribbon_6
AAA_30
WHD_PriA_bact
AAA_19
ArfA
Motif
Other DBs
NCBI-ProteinID:
WJV56173
LinkDB
All DBs
Position
4703015..4705210
Genome browser
AA seq
731 aa
AA seq
DB search
MPVVQVALPVPLARTFDYRLPEGLCPVPGMRVSVPFGNRKMIGIVTTLNNSSELPLDQLK
VVREVLDDEPLFPASLWRILLWAVDYYHYPIGEVLFHALPIILRQGKPAHTAPLWQWFAT
EQGRAMPLASLKRAPKQQQALAALLHAPLYRHQVSESALTETALQALRSKSLCDLRPLSR
QLSDWRSEFSIIGERLKLNTEQATAIGAIRSEDNHFSAWLLAGITGSGKTEVYLSVLENI
LAQGKQALILVPEIGLTPQTISRFKDRFTAPVEALHSGLNDSERLAVWLRAKSGEAAIVI
GTRSALFTPFARLGLIVIDEEHDGSYKQQEGWRYHARDLAVFRAREEDIPIVMGSATPAL
ETLYNVQIGKYRQLRLSKRAGNARLAQQHILDLKGLPLTSGLSQPLINRIHHHLNNDNQV
ILFLNRRGFAPVVMCHECGWIAECQRCDHYYTLHQHQQILRCHHCDSQRPVPPQCPHCGS
THLVPVGLGTEQLEQALPALFPQTPITRIDRDTTSRKGSLEQQLTQVRQGGARILIGTQM
LAKGHHFPDVTLVVLLDVDSSLFSADFRAAERFAQLYTQVSGRAGRAGKAGEVILQTHHP
EHPLLQTLLQKGYDDFANQTLKERQSVFLPPFTSHVLFRAEDHDNQQATLFLQQLRNLLE
ASPLRDDALWLMGPVPALQPKRAGRFRWQLLLQHPSRARLQQLLRNSLALIDTLPQTRKV
KWILDVDPTDS
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtcgttcaggtcgccctacccgtgccgctggcacgcacattcgattatcgatta
cccgaagggttgtgccctgtgccgggtatgcgtgtcagcgtaccctttggcaaccgtaaa
atgattggcattgtcaccacactgaacaacagcagcgaactgccgttggatcagctcaag
gtcgtgcgagaagttctggatgacgaaccactttttcctgccagtctgtggcgcattctg
ctttgggccgtggattattatcattaccccatcggcgaagttctgtttcatgccctgcca
attatactgcgtcagggtaaaccggcccataccgcaccgctttggcagtggttcgcaaca
gaacaagggcgggcaatgccactggcatcactgaaacgagcccctaaacagcaacaggcg
ctagccgccttactacatgctccactttaccgtcatcaggtcagtgagtcagcactaacc
gaaaccgcgttacaggcattgcgcagcaaaagcctgtgtgacctgagacccctttcccga
caactctccgactggcgtagcgaattcagcatcatcggtgaacgattaaagctgaatacg
gagcaggccaccgccataggcgcgatacgcagcgaagacaaccatttttccgcctggtta
ctggcggggattacaggatccggcaaaaccgaagtgtatctcagcgtgctggaaaatata
ttggcgcaaggcaaacaagctctgatactggtgccggaaatcggcctgacgccacaaacc
atctcccgctttaaagaccgttttactgcaccggtagaagccctgcattccgggctgaat
gacagtgagcgccttgctgtctggttgcgggccaaaagcggcgaagcggcgattgtcatc
ggtactcgctccgcgctgttcacgccatttgcccgattggggctgattgtgatcgatgaa
gaacacgatggatcttataaacaacaggaggggtggcgctatcatgcccgcgatctggcg
gtatttcgtgccagggaagaagacattcctattgtcatgggttccgccactccggcgctg
gaaacattgtataacgtacagattggcaaatatcgtcagctccgactcagtaaacgtgca
ggtaatgcccgactggcacaacagcatatactcgatttgaaaggattgccgttgactagc
ggcttgtcccaaccactgatcaaccgtatccatcatcacttgaataatgataatcaggtg
attctgtttttgaaccgacgcggttttgccccagtggtgatgtgtcatgaatgtggttgg
attgctgagtgccagcgctgcgatcactactatacattgcaccaacatcagcaaatattg
cgctgccatcactgtgacagccaacgtccggtgccaccacaatgtcctcactgcggctct
acgcatctggttcctgtagggctaggcaccgagcagttggagcaggcgctacccgctttg
tttccccagacccccattacccgcattgatcgggacactaccagccgcaaaggctcgctg
gaacaacaactgacacaggtaaggcaaggcggggcacggatactcatcgggacacagatg
ctggccaagggccaccattttccggatgtcacactggtcgtgctactggatgtagacagt
tcattgttttccgctgattttcgagccgcagaacgcttcgctcagctttatacgcaggta
tccggtcgcgctggtcgcgctggcaaagcaggggaagtgattcttcagactcatcatcca
gaacacccgctattgcagactttgctgcaaaaagggtatgacgactttgctaaccagact
ctgaaagaacgtcagagcgttttcctaccgccgtttaccagccatgtcctgttccgggca
gaggatcatgataatcaacaggccacgctgttcctgcaacaactacgcaatctgctggaa
gccagcccactacgggatgatgccctctggctaatgggacccgttcccgcactgcaaccc
aaacgagcgggtcgctttcgctggcaactactgcttcagcatccatcccgcgctcgtcta
cagcaattgctccgaaattcactggccttgatcgacacacttccacagacgcgaaaggtg
aaatggatactggatgttgacccaacagacagctaa
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