Prodigiosinella aquatilis: PCO85_22170
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Entry
PCO85_22170 CDS
T09220
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
prod
Prodigiosinella aquatilis
Brite
KEGG Orthology (KO) [BR:
prod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
prod03021
]
PCO85_22170 (rpoH)
Transcription machinery [BR:
prod03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PCO85_22170 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_10
UCR_14kD
Motif
Other DBs
NCBI-ProteinID:
WJV53796
LinkDB
All DBs
Position
complement(4761413..4762270)
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AA seq
285 aa
AA seq
DB search
MTKDMQTFTLVPQGSLEGYIRAANAYPMLTAEEERALAERLHYQGDLEAAKQLILPHLRF
VIHVARNYSGYGLPQADLIQEGNIGLMKAVRRFNPDVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKVATTKAQRKLFFNLRKTKQRLGWFSADEVELVARELGVSSKDVLEMESRMSAQDM
TFDPTPDDDAQPGHAMAPMLYLQDKSSDFADGIEEDNWESHAADKLSFALKGLDERSQHI
IRARWLDDDNKSTLQELADHYGVSAERVRQLEKNAMKKLRTAIEA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagatatgcaaactttcactttagttccccagggcagtctggaagggtacatt
cgtgccgccaatgcctatccgatgctgacggcagaggaagaacgggcgctggctgaacgg
ctgcattaccagggagatctggaggctgccaagcagcttatcctgccacacctgcgcttt
gttattcatgtcgcccgtaattattctggttatggcttgccgcaagcggacttgatccag
gaaggcaacatcggtctgatgaaggcggtgcgtcgttttaatcctgatgtgggtgttcgt
ctggtttcctttgccgtacattggattaaggcggaaatccacgaatatgtgttgcgtaac
tggcgtattgtcaaagttgcgaccactaaagcacagcgtaagctgttctttaatctgcgt
aagactaaacagcgcctcggctggttcagtgcggatgaagttgaactggtagcgcgtgag
ctgggtgtgtccagcaaagatgtccttgaaatggaatcccgcatgtcagcgcaggatatg
acttttgatccgacgccggatgatgatgcacaaccgggtcatgctatggcgccgatgctt
tatctacaggataaatcctctgactttgctgatggcatcgaggaagataactgggaaagt
catgcggctgacaaactgagctttgccctgaaagggttggatgaacgtagtcagcatatc
atccgcgcccgctggctggacgatgacaacaagtccacgttgcaggagttagccgatcat
tatggtgtttctgctgagcgtgttcgtcaattggaaaagaatgccatgaaaaagctgcgt
actgcgatagaagcgtag
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