Prodigiosinella aquatilis: PCO85_22815
Help
Entry
PCO85_22815 CDS
T09220
Name
(GenBank) right-handed parallel beta-helix repeat-containing protein
KO
K22994
pectate disaccharide-lyase [EC:
4.2.2.9
]
Organism
prod
Prodigiosinella aquatilis
Pathway
prod00040
Pentose and glucuronate interconversions
prod01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
prod00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
PCO85_22815
Enzymes [BR:
prod01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.9 pectate disaccharide-lyase
PCO85_22815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pel9A-like_beta_helix
DUF3781
Motif
Other DBs
NCBI-ProteinID:
WJV53914
LinkDB
All DBs
Position
4905584..4907797
Genome browser
AA seq
737 aa
AA seq
DB search
MKYAVSGLITVALNSFLLMGSTPSFAAPQAAPLVWHSIAFGQSTDVNFSSNVLPEKIGVN
DVTINGKKLTSTDKADLSAPITIESRGGKIANTHDGLTFFYTELPANVNFTLQSDVTVDQ
FGPETKARPAAQEGAGILVRDILGVPRQNPLKVGYEEFPAASNMVMNAIMTQDKKAKNAK
TEVKIQAISRNGVIQPWGNIGAKISKSSYQEKINLEQTPTFRLKLERTDDGFITSYAPKD
SDQWVTKTVKGADLVTQQDKKHYYVGFFASRNAKVTINNASLTTSPAHTKLSPAFKAESF
APLLQVASSTLSVHDNYLVQARVNYNGTLAVYQNGKELGKAHAIKAGEMFSLPAKLTAPK
TDFKLVYTPGDGKDKSPQEASFSVEKVTFADAKNLYVSPEGKSTNNGSKKAPLDITTAIS
ALPAGGTLWLMPGDYAATEIPVTASGTAKAPKHLIAVEGKSVIHGLNLNASYWIVKGVEI
TDKSFRIEGSYNRIDRVVAHNCDDTGIQVSSTGNVGKPLWASHNLILNSESYSNQDPGKI
NADGFAVKMRVGEGNVIRGAFSHDNIDDGFDLFNKIEDGPNGVVVIENSIALNNTSNGFK
LGGEGQPVAHQIKNSIAIGNHLDGFTDNFNPGALVVENNIALDNQRFNFIFRPSPYYGPE
KQGIFKNNVSLRTSAGKYDDAVVGRVDASNYFIKDNHSINNKGKEITTAAYKSIVVPQTF
TRDAKGNLQLGDFLKKK
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacgctgtttccgggctcattactgtagcccttaattcatttttattgatgggg
agcacgccttcttttgctgctcctcaggcagcaccgctggtctggcacagcatcgctttc
gggcagtccactgatgtgaatttctcctccaacgttttacctgaaaaaatcggggttaat
gacgttaccatcaacggcaaaaaacttacttcaacagataaagccgatttatccgcacca
attaccattgaaagtcggggtggaaaaatagccaacacccatgatggattaacgtttttc
tatactgaactacccgccaatgtaaatttcacgctgcaatctgacgttacggttgatcag
tttggtcctgagacaaaggccagaccagccgcacaggaaggtgctgggatattagtacgg
gatattttgggtgtacctcggcagaatccactgaaagtgggatatgaggagtttccggca
gcctcaaacatggtgatgaatgccatcatgacccaggataaaaaggccaaaaatgccaaa
actgaagtaaaaatacaggctatttcacggaatggtgtgatacagccgtggggtaatatt
ggtgctaaaattagcaaaagtagttatcaggaaaaaattaatctggaacaaacgccaaca
ttccgcctgaaactggaacggactgacgatggctttatcacttcttatgcgcctaaagac
agtgatcaatgggtaacaaaaaccgtcaaaggtgctgatctggtcacccaacaggataaa
aagcattactatgtcggtttcttcgcctcacgtaatgcaaaagtcaccattaataatgcc
agcctgaccaccagtccagcgcatacaaaattatcacccgcctttaaagcagaaagtttc
gcaccattgttgcaagtggcttcttcaaccctttccgttcacgacaactatctggtccag
gccagagtgaactacaacggtacactggccgtatatcagaatggcaaggagcttggcaaa
gcacacgcgatcaaagccggtgaaatgttcagcctgccagcgaagctgacagcgccgaaa
acagatttcaaactggtttacacacctggtgacggtaaagataaatcgccacaggaagcg
agtttcagtgtagaaaaagtgacttttgcggatgccaaaaatttgtatgtttctcctgag
gggaaatcaaccaacaatggtagcaaaaaagcgccactggatatcacgacagctatcagt
gcattacctgcaggcggtacgttgtggttaatgcctggagattacgctgcaaccgaaatt
ccagtaaccgccagcggtacagccaaagcgccaaaacatctgattgcagttgaaggtaag
agcgttatccatggactcaatctcaacgctagctactggattgtaaaaggtgttgaaatt
actgataaaagcttccgtatcgaaggcagttacaaccgcatagatcgtgtggtggcacac
aattgcgacgacaccggaattcaggtttcatcaacaggaaatgtgggaaaacccttgtgg
gccagccataacctgattttgaattcagaatcctacagcaaccaggatccaggtaaaatc
aacgcggatggatttgcagtaaaaatgcgcgttggtgaaggtaatgtgatccgtggtgcc
ttctctcatgacaatattgatgatgggtttgacctattcaacaaaattgaggatggtccg
aacggggttgtggtgatcgagaattctattgcactcaacaacaccagcaacggtttcaaa
ctgggaggggaaggtcagccggttgcacatcagattaaaaacagcattgccattggcaat
catctggatggctttaccgacaactttaacccaggtgcgctagtcgttgagaataatatt
gcacttgataaccaacgctttaactttatcttccgcccaagcccgtactatggcccggaa
aaacagggaatatttaaaaataatgtatccctgcgcacgtcagcgggtaaatatgatgac
gctgtcgtgggtcgtgtagatgccagtaactacttcatcaaagacaaccattcgatcaac
aataaagggaaagaaatcactactgccgcctataaatccattgtcgtaccacaaacattc
acgcgtgatgcaaaaggcaatttgcagctgggtgattttctgaagaaaaaataa
DBGET
integrated database retrieval system
