Pedobacter roseus: H9L23_00100
Help
Entry
H9L23_00100 CDS
T06980
Name
(GenBank) lipid A deacylase LpxR family protein
KO
K09953
lipid A 3-O-deacylase [EC:3.1.1.-]
Organism
proe
Pedobacter roseus
Pathway
proe00540
Lipopolysaccharide biosynthesis
proe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
proe00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
H9L23_00100
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
proe01005
]
H9L23_00100
Lipopolysaccharide biosynthesis proteins [BR:
proe01005
]
Lipid A
H9L23_00100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxR
DUF6854
Motif
Other DBs
NCBI-ProteinID:
QNN42570
UniProt:
A0A7G9QGU5
LinkDB
All DBs
Position
complement(17929..18894)
Genome browser
AA seq
321 aa
AA seq
DB search
MKLMLKLYVTLLFIGIAEIGYAQNYKNELVVISENDAYIDITSDRYYTNGAFIKFRHALN
GENLKSGRSKEIIGFEFGQKIYNPYYSFVPNPALHDRPFTAYLYGEANYSRFYENKQMLK
VSAQLGVTGKDALGEKFQKAFHKLVGQNQIEGWEYGLNSEPTLNLGAEYNKLLVTTNNKV
FDVTGTASAALGNVITKANLGAMFRLGRFNDMEGSAAFNSIVSNNNAYKATRKYELFLSV
SPQLHAVAFDSSLQGGLFRSDKGPITFKPKPFVFTTQVGLTFAIARWTANYTATFTSNEV
KNSATGYRYAFYSLAYRFSKN
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaatgctcaaattatacgtcacactgctatttatcggcatagcggaaattggt
tatgcccaaaattataaaaatgaacttgttgttatctctgaaaacgatgcttatatagat
attaccagcgaccgctattatactaacggtgcatttattaaattcagacatgctttaaat
ggtgaaaatttgaaatccggaagaagtaaagagattattggttttgagtttggtcaaaag
atctacaacccatattatagtttcgtacctaatccagctttacatgataggcctttcaca
gcttatttatatggcgaagcaaattatagccggttttacgaaaataaacaaatgctaaag
gtttctgcacagcttggcgttacaggaaaagatgcgctgggcgaaaaatttcagaaggcg
tttcacaaattagttggccaaaaccagattgaaggatgggaatatggcttaaacagcgag
ccgacattgaacctgggcgccgaatacaacaaacttttagtaaccaccaataacaaggta
tttgatgttacgggaacggcttcggctgcgcttgggaacgtaattacaaaggccaacctt
ggcgctatgtttcgtttgggtagatttaatgatatggaaggctcagcagcttttaacagt
atagtgagcaataacaatgcttataaagctacccgtaaatatgagctttttctttcagtt
agtccgcaattacatgctgtggcttttgactcgagcctgcagggtggattattcaggagt
gataagggaccgattacctttaaaccaaaaccttttgtttttaccacgcaagtgggttta
acgtttgccattgcaaggtggacggccaattatacggctacttttacatcgaacgaagtt
aaaaacagtgccactggctaccgctatgccttttatagtcttgcttaccgttttagtaaa
aactaa
DBGET
integrated database retrieval system
