KEGG   Pedobacter roseus: H9L23_01185
Entry
H9L23_01185       CDS       T06980                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
proe  Pedobacter roseus
Pathway
proe03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:proe00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    H9L23_01185 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:proe03400]
    H9L23_01185 (uvrA)
DNA repair and recombination proteins [BR:proe03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     H9L23_01185 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      H9L23_01185 (uvrA)
SSDB
Motif
Pfam: ABC_tran UvrA_inter SMC_N UvrA_DNA-bind AAA_21 nSTAND1 AAA_16 AAA_15 AAA_29 DnaJ_CXXCXGXG nSTAND3 RsgA_GTPase ATPase NACHT Viral_helicase1 AAA_23 cobW SLFN-g3_helicase
Other DBs
NCBI-ProteinID: QNN42762
UniProt: A0A7G9QHD7
LinkDB
Position
251548..254361
AA seq 937 aa
MSKKEAEKDPHKNIIIKGARVHNLKNIDVAIPKNKLVVVTGMSGSGKSSLAFDTLYAEGQ
RRYVESLSSYARQFMGRMNKPDVDYIKGIAPAIAIEQKVITSNPRSTVGTSTEIYDYLKL
LFSRIGKTISPVSGKEVKKDSVSTVVDYVNAMPEDTTVTIFCPLYPHNNRTIKEELAILL
QKGFLRVLINDKIEKIESVLDDSDFKDAELTDDKTVQILIDRIVTNQEEETLSRLADSAQ
TAFFEGKGDCYVEAQGTTKHFSDRFELDGIKFEEPTPNFFSFNNPYGACKRCEGYGNVIG
IDEDLVIPDKSKSVYDNAIAPWRGEKMNVWLQNFIKAAPKFEFPIHRPYSALTEKEQQLL
WTGNKYFAGLDAFFKELEEQTYKIQYRVMLSRYRGKTTCPDCKGSRLRKDASYVKIAEKS
IIDVVLMPLSKALVFFNELKLNANDTKIAKRLLAEIDNRFLYLNNVGLGYLTLNRLSNTL
SGGESQRINLATSLGSSLVGSIYVLDEPSIGLHPRDTNKLIEVLVSLRNVGNTVIVVEHE
EEMMRAADYIIDIGPEAGTHGGNLVFSGNYEEILKDKNSLTGRYLSGQEKIAIPEKRRKW
KDHILIKGARENNLQNIDVKFPLGVFTAVSGVSGSGKTSLVKKILYPALQKAIGNYAGEQ
TGAYDGIFGNYDLVSAVEMVDQNPIGRSSRSNPVTYVKAWDDIRALFSGLASAKAAGLKP
AAFSFNVEGGRCDVCQGEGEVKIEMQFMADIYLPCEACNGKRFKQQVLDVTYKEKNVSEI
LDMTIDEAVDFFKDEQKILNKLNPLVDVGLGYVHLGQSSNTLSGGEAQRIKLASFLIKGN
NANKTLFIFDEPTTGLHFHDIKKLLKALNTLIEQGNTILVIEHNMDMIKCADWVIDIGPE
GGDGGGQLVFEGIPEDLVKVEKSYTGKYLASHLNLNP
NT seq 2814 nt   +upstreamnt  +downstreamnt
atgagcaaaaaagaggccgaaaaagatccgcataaaaatattatcataaaaggtgcccgt
gtgcacaacctaaaaaacatcgatgttgccattccaaaaaataagcttgtggtggttacg
ggtatgtctggttcaggcaaatcttcgcttgcgtttgatactttgtatgcagaggggcaa
cgcaggtatgtagaaagtttatcttcctatgcccgccagtttatgggtaggatgaataag
cctgatgttgattatattaaaggtattgctccggcaattgccatcgagcaaaaggtaatt
acttccaatccacgctcaacggttggtacctctaccgaaatttacgattacctgaaattg
cttttttcccgaatcgggaaaaccatttcgcctgtctctggcaaagaggtaaaaaaagat
tcggtaagtacagtggtggattatgtaaatgcgatgcccgaagatacgacggtaacgatt
ttttgcccgctgtacccgcacaataaccgaacgattaaggaagaactggccattttattg
caaaaaggttttttacgtgttctgattaacgataaaatagaaaaaattgaatctgttctg
gatgactctgattttaaagatgcagaattaacagatgataaaaccgttcagatcctcatt
gaccgtattgtaaccaatcaggaagaagaaactttaagtcgcctggccgattcggcacag
accgctttttttgaaggtaagggcgattgttatgtggaggcacaaggtaccacaaaacat
tttagcgaccgttttgagcttgatgggatcaaatttgaagaacctacgccaaattttttc
tctttcaataatccttatggtgcctgtaagcgttgtgagggttatggcaatgtaatcggg
attgacgaagatcttgtaattcctgataagagcaaaagtgtttacgataatgccattgcc
ccctggcgtggagaaaaaatgaatgtttggctgcagaattttattaaagctgcaccgaaa
ttcgaattccctatccaccgcccatatagtgctttaaccgaaaaggaacagcagttgcta
tggaccggtaataaatattttgcaggacttgatgccttttttaaggaactggaagaacag
acctataaaatacagtaccgtgtaatgttatcgcgttaccgtggaaaaaccacttgcccg
gattgtaaaggttcgcgtttgcgtaaagatgcttcttatgttaaaatagctgaaaaatcc
attattgacgtagttttaatgccattatcgaaagctttggttttctttaacgaattgaaa
ttaaacgcgaatgatacgaaaattgccaaacgtttattggctgaaattgataaccgtttc
ctttatttaaataatgtgggcttaggttatcttacgctcaaccgtttatcaaatacttta
tctggtggagaatcgcaaaggatcaatttggctacctctttgggaagtagcctggtaggg
tccatttacgtactggatgaaccaagtataggtttacacccacgcgatacaaataaactg
atcgaggtattggtttcgctccgtaatgtaggcaatacggttattgtggtagagcatgaa
gaagaaatgatgcgtgctgccgattatattattgatatcggtccggaagcaggtacacat
ggtggaaacttggttttcagtggtaattacgaagagattttaaaagataaaaacagttta
accggtaggtatttatccggacaggaaaaaattgccataccagagaaacgacgtaaatgg
aaagaccatattctgattaaaggtgccagggaaaacaaccttcagaatattgatgtgaaa
tttccgcttggtgtttttactgcagtaagtggtgtttcgggatctgggaaaacgagtctg
gttaaaaagatactttatccggcgcttcaaaaagcaataggtaattatgctggtgagcaa
acgggtgcctatgatggtattttcgggaattacgacctggtaagtgcagtagaaatggtt
gatcagaatcctatcgggcgttcgagccgttctaatccggtaacctatgtaaaagcatgg
gatgatatccgggccttgttctcaggactggcatcggcaaaagctgcaggattaaaacca
gctgcattttcttttaatgtagagggtggccgttgtgatgtttgccagggcgagggtgaa
gtgaaaattgaaatgcagtttatggccgatatttacctgccatgcgaagcctgtaatggt
aagcgttttaaacaacaggttttagacgttacttataaagagaaaaatgtatccgaaatt
ctggatatgacgatcgatgaagctgttgatttctttaaggatgagcaaaaaatcctgaat
aaattaaatccattggttgatgttggtttgggatatgtgcatttaggtcaatcttcaaac
actttatcaggtggtgaggcacaacgtattaaactggcctctttcctgattaaagggaac
aatgcgaataaaacgctatttatttttgatgagccaactacaggtttgcacttccatgat
attaaaaaactgttaaaagcgctaaataccttaatcgaacagggaaataccattttagtg
attgaacacaatatggacatgattaaatgtgcggattgggtaatcgatatcggcccggaa
ggtggcgatggtggcggccagctggtgtttgaagggatacccgaagacctggttaaggta
gaaaaatcgtacaccggaaaatatttagcatcgcatttaaatttaaatccataa

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