KEGG   Pedobacter roseus: H9L23_01405
Entry
H9L23_01405       CDS       T06980                                 
Name
(GenBank) RNA polymerase sigma-70 factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
proe  Pedobacter roseus
Pathway
proe02020  Two-component system
Brite
KEGG Orthology (KO) [BR:proe00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    H9L23_01405
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:proe03021]
    H9L23_01405
Transcription machinery [BR:proe03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     H9L23_01405
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_r4 HTH_24 Sigma70_ECF Xre-like-HTH HTH_3 HTH_23 HTH_37 HTH_Tnp_4 HTH_19 HTH_AsnC-type HTH_10 GerE HTH_IclR MarR
Other DBs
NCBI-ProteinID: QNN42802
UniProt: A0A7G9QHH7
LinkDB
Position
310013..310606
AA seq 197 aa
MSVTGMIYTELTDDDLLHHLKNDDHLAFTEVFNRYSPLLYGHAYNKLRSESDARDVVQEM
LMKLWDKRGSIEIGNNLGGYLFVALRNTIFNLIKHKNHVHAYADTFAKANADSGIYTDTL
IREKQFAAMIEAEIASLPPRMRAVFELRRKENLSNKEVAAQLGITESTAADQMKKALRIL
KTRIGLILIVVHYLNVK
NT seq 594 nt   +upstreamnt  +downstreamnt
atgagtgtcacgggcatgatctatacggaattaactgacgatgatcttttacatcattta
aaaaatgatgatcatttggcttttaccgaagtatttaacagatacagtccattgctttat
ggtcatgcgtataacaagctccgtagcgaaagcgatgcaagggacgtggtacaggaaatg
ttgatgaagctgtgggataagcgtggatcgatcgaaatcggaaacaatttgggtggttac
ctctttgtggctttgaggaataccatttttaacctgatcaaacataaaaatcatgtacat
gcttacgctgatacttttgcaaaagccaatgccgatagtggtatttataccgatacgctg
atccgtgagaaacagtttgcagccatgatagaagccgagattgccagtttgcccccacgg
atgagggccgttttcgagctgagaagaaaagaaaacctatcgaataaagaagttgcggca
caattgggcattaccgaatctaccgctgccgatcagatgaaaaaggcactccgcatcctt
aaaacacggatcgggctgatcttgatcgttgtacattatcttaatgtaaaataa

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