Pedobacter roseus: H9L23_03935
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Entry
H9L23_03935 CDS
T06980
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
proe
Pedobacter roseus
Brite
KEGG Orthology (KO) [BR:
proe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
proe03032
]
H9L23_03935 (gyrB)
03400 DNA repair and recombination proteins [BR:
proe03400
]
H9L23_03935 (gyrB)
Enzymes [BR:
proe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
H9L23_03935 (gyrB)
DNA replication proteins [BR:
proe03032
]
Prokaryotic type
DNA Topoisomerases
H9L23_03935 (gyrB)
DNA repair and recombination proteins [BR:
proe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
H9L23_03935 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Toprim_4
GyrB_hook
Motif
Other DBs
NCBI-ProteinID:
QNN43260
UniProt:
A0A7G9QIT5
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All DBs
Position
880563..882521
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AA seq
652 aa
AA seq
DB search
MSEEQDLKSNYSADNIQVLEGLEAVRKRPSMYIGDTGVKGLHHLVYEVVDNSIDEALAGH
ADTIDVRILEGNSIRVEDNGRGIPTGINTKENKSALEIVMTVLHAGGKFDKDTYKVSGGL
HGVGVSCVNALSTDLKAEVHREGKIWMQEYKIGVPQYDVKEVGTTDKRGTIVTFTPDDTI
FTQTTEYKYDTLAGRLRELSFLNKGIKLTLTDEREKLDDGSYFSETFHSEGGLKEFVAFL
DDTRTSILAEPIYIEGIKNGVPVELAFQYNDSYSENVHSYVNNINTHEGGTHIAGFRRGL
TRTLKNYADKEGLLKNVKMEITGDDFREGLTAVVSVKVQEPQFEGQTKTKLGNSEVMGSV
DIAVGEALGNYLEENPKEAKMIINKVILAATARAAARKAREMVQRKSVMGGSGLPGKLAD
CSDSDPERCEIYLVEGDSAGGTAKQGRDRNIQAILPLKGKILNVEKAMEHKIYENDEIKN
MFTAIGVSIGTPEDNKALNMTKLRYHKIVIMTDADIDGSHITTLILTFFYRYMRALIEAG
YVYIASPPLYQVKKGKEFEYCWNDVQRDAAVQRLKGAGKEDSVHIQRYKGLGEMNAEQLW
ETTLNPATRTLLQATIESAAECDHTFSMLMGDEVAPRREFIERNAKYAKIDA
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagaacaggatttaaagtcaaattattcggcagataatatacaggttttagaa
ggtttagaagcggtgcgtaagcgcccttcaatgtatataggtgatactggtgttaaaggt
ttacaccatttggtttacgaggttgtagataactctattgatgaggctttggccggtcat
gcagataccatcgacgttcgtattttagaaggtaactcgatcagggttgaagataacgga
cgtggtattccaaccgggatcaacacgaaagaaaataaatcggcgcttgaaatcgttatg
acggttttacacgccggtggtaaatttgataaagatacttacaaggtttcgggtggtttg
catggtgtaggggtaagttgcgttaacgcattatctaccgatttaaaagcagaagtgcac
cgcgaaggtaagatctggatgcaggagtataaaattggcgttccacagtatgatgttaaa
gaagttggaactactgataaacgtggtacgattgtaacattcactccggatgataccatt
tttacccaaactaccgaatacaaatatgatactttagccggccgtttgcgcgagttatct
ttcttaaataaagggattaaattaacgttaactgatgagcgtgagaaactggatgacggt
tcttatttttcagaaactttccattcagaaggtggtttaaaagaatttgttgccttttta
gatgatacccgtacttcgattttggcagagccgatttatatcgaagggattaaaaatggt
gttccggttgagctggctttccagtataacgatagttattctgaaaatgtgcactcttat
gtaaataacattaatactcacgagggtggtacacacattgccggtttccgtagaggatta
acccgtactttaaaaaactatgccgataaggaaggtttgttaaagaacgtaaaaatggaa
attaccggtgatgatttcagggaaggtttaactgccgtagtttcggtaaaagtacaggag
cctcaatttgaagggcaaaccaaaactaaactgggtaacagtgaggtaatgggatcggtt
gatattgcagtaggtgaagctttgggtaattacctggaagaaaaccctaaggaggccaaa
atgattatcaataaggtaatcttggcagctacagcgcgtgcagcggcccgtaaagcccgc
gaaatggtacagcgtaagagcgtaatgggcggttcaggtttacctggtaaactggccgat
tgctcagacagtgatccggaaagatgtgagatttacctggtagagggtgactcggcaggt
ggtactgctaaacaaggtcgcgatcgtaatattcaggctattttaccattaaaaggtaag
attctgaacgtagagaaggcgatggagcacaaaatttacgagaacgacgagatcaaaaat
atgttcacggctattggggtaagtattggtacgccagaggataacaaagcgttaaacatg
actaaactgcgttaccacaagattgtaatcatgacggatgcggatatcgacggttcacac
attaccacgttgattttaaccttcttctaccgttacatgagggcattaatcgaagcaggt
tatgtttatattgcttcgccaccactttatcaggttaaaaaaggtaaagaattcgaatat
tgctggaatgatgtgcaacgcgatgcggctgtacaacgtttaaaaggtgcaggtaaagaa
gatagtgtacatatccagcgttataaaggtttaggtgagatgaatgctgaacaattgtgg
gaaactactttgaacccggcaacacgtactttattgcaggccactatcgaaagtgctgca
gagtgtgatcatactttctcaatgttaatgggcgatgaagttgctccacgtagagaattt
attgagcgtaatgcaaaatatgcgaagatagatgcatag
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