Pedobacter roseus: H9L23_04555
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Entry
H9L23_04555 CDS
T06980
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
proe
Pedobacter roseus
Brite
KEGG Orthology (KO) [BR:
proe00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
proe01002
]
H9L23_04555
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
proe01011
]
H9L23_04555
Peptidases and inhibitors [BR:
proe01002
]
Cysteine peptidases
Family C82
H9L23_04555
Peptidoglycan biosynthesis and degradation proteins [BR:
proe01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
H9L23_04555
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
Motif
Other DBs
NCBI-ProteinID:
QNN43379
UniProt:
A0A7G9QJ54
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All DBs
Position
999246..1000808
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AA seq
520 aa
AA seq
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MKKFRFLILPFILFISACGWFKSPPEIGKVLSEHFKNKIYKDFDTVAYDSVFVKTMDSLS
VKFVNPKTIKAFYSNHSAEPKLVTRFYINGELDSLVNYLDQSKVHGFNPRIFKGDEIKAL
LEELTANKFKKVEETYPVIAKLELLSANAYLNYNNYLKYGVINPRTIFSRYYIKVRRPDS
AGMLNLLNSKNLLDTLRSVQPKSIQYKALQSAYLNTDAADEKRILLLNMERFRWKLPETG
DNYVQVNIPDFRLTWLNKLDTVISMKVCVGGKRENGYEDKLKAFAKSGNLDDKPKNHETP
LLFSKINSIQANPIWNIPVSIAQSEIYWMARKDPYYLSNSNIKVYYKDKLIGEPDTINWN
KYSRDKLPFKFKQGSGGGNALGKFKFIFDNSSSIYLHDTNNKNGFNLTNRAISHGCVRIE
KPLEFAELLVNDSYTYDKLRAEVDLPPIDSTHVKWYKKRMAQKADTTKAFQLKPAWFGPK
KSVPLIITYITAWSQNDKIEYRPDVYGMDEKLWTAMKKFR
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaagtttcgctttctaattttgccctttattttgttcatttctgcctgtgggtgg
tttaaaagccctcctgagatcggaaaagtgctgtctgaacattttaagaacaagatctat
aaggattttgatactgtagcttatgatagcgtttttgtgaagacaatggacagtctttct
gttaaattcgttaatccaaaaactataaaagctttttattcaaatcattctgctgaacct
aaattagttacccggttttatattaacggggaattagattcgctggtaaactatttggat
caaagtaaagtacatggttttaaccccaggatttttaaaggagatgaaattaaggcctta
ttggaagaattgaccgccaataaatttaaaaaagtggaggagacttatccggtaatcgct
aaattagaactgctatcggcaaatgcttatctaaattataacaattaccttaaatatggg
gtgataaatccccgcactattttctcgcgttactacataaaggtgaggcgcccagacagc
gctggaatgctcaatcttttgaacagtaaaaaccttttagatacgttaagatctgtgcag
ccaaaatcaattcaatataaggctttgcagtctgcatatttgaatacggatgctgcagat
gaaaagcgtattttgttattaaatatggagcgtttccgttggaaattgccagagaccgga
gataactatgttcaggtaaatattcccgattttagattaacctggctgaataaattagac
actgtaatttcgatgaaagtttgtgtgggtggaaagcgtgaaaatggttatgaagacaag
ctaaaagcctttgcaaaatcaggcaatttagatgataaaccgaagaaccacgaaacgcca
ttattgtttagtaaaatcaactccattcaggccaatccgatatggaatattccggtaagt
attgcacaaagtgagatctattggatggcccgaaaagatccttattatttatctaacagt
aacatcaaagtttactataaagataagctgattggcgagcccgataccatcaattggaac
aagtattcgagggataaattgcccttcaaatttaagcagggatctggtggtggaaatgcc
ttagggaaattcaaatttattttcgataacagctctagtatttacctccacgataccaat
aacaaaaacggatttaatttaacaaaccgggccattagtcatggttgtgtgcgcatcgaa
aaacctttggagttcgccgaacttttagtgaacgattcatacacttatgataaacttagg
gctgaggttgatttgccaccgatagatagtacgcatgtaaaatggtataaaaaacgcatg
gcccaaaaggcagatacaacaaaggcttttcaattaaaaccagcctggttcggacccaaa
aaatctgttcctttaatcattacctatattacagcctggtcgcaaaacgataagatcgaa
taccggcctgatgtttatggtatggatgaaaaactttggaccgcgatgaaaaagttcagg
taa
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