Pedobacter roseus: H9L23_06270
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Entry
H9L23_06270 CDS
T06980
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
proe
Pedobacter roseus
Pathway
proe02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
proe00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
H9L23_06270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
proe03021
]
H9L23_06270
Transcription machinery [BR:
proe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
H9L23_06270
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
GerE
HTH_24
Sigma70_ECF
Motif
Other DBs
NCBI-ProteinID:
QNN43693
UniProt:
A0A7G9QK18
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All DBs
Position
1400810..1401394
Genome browser
AA seq
194 aa
AA seq
DB search
MRIYGSYSDSELAFLLTKGDELAFTEIYNRFYALLFIHASKRLNDEEEAKDLLHQLFESL
WVKRMQVAPDGNLSGYLYAAVRNRILDVFAHSKVENKYVASLQDYIDQDHVQTDHLVREK
QMSMLIEQEINALPPKMREIFILSRKENKSHKEIAIQLGLSELTVKTQVKKALKILKSRL
GLVIYVTLLFKTYR
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatttacggttcatattctgatagcgaattggcatttttgttaactaaaggtgat
gaactggcctttacagaaatttacaatcgtttttatgccttactttttatccacgccagc
aaacgcttaaacgatgaagaggaagctaaagatctgcttcatcaattattcgagtcgctt
tgggttaaacgcatgcaagtggcacctgatggtaatttatcaggttatttatatgctgct
gtacgcaacaggatcctggatgtgtttgcccacagcaaggttgaaaacaaatacgtagcc
tctttacaggattatatcgatcaggatcatgtgcaaactgatcatttagtgcgcgagaag
cagatgagtatgcttattgaacaggaaataaatgcattgccacccaaaatgcgtgaaatt
tttatcttaagccgaaaagaaaataaatctcataaagaaattgccatccaactcggcctt
tcagaacttactgttaaaacacaggttaaaaaagcgcttaaaattcttaaatcaaggttg
ggtctcgttatttacgttactttattgtttaaaacgtaccgataa
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