Pedobacter roseus: H9L23_11075
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Entry
H9L23_11075 CDS
T06980
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
proe
Pedobacter roseus
Pathway
proe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
proe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H9L23_11075 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
proe03019
]
H9L23_11075 (pnp)
03016 Transfer RNA biogenesis [BR:
proe03016
]
H9L23_11075 (pnp)
Enzymes [BR:
proe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
H9L23_11075 (pnp)
Messenger RNA biogenesis [BR:
proe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
H9L23_11075 (pnp)
Transfer RNA biogenesis [BR:
proe03016
]
Prokaryotic type
tRNA degradation factors
H9L23_11075 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
KH_1
PNPase
KH-I_KHDC4-BBP
S1_RRP5
HutF_N
Vip3A_N
Motif
Other DBs
NCBI-ProteinID:
QNN44574
UniProt:
A0A7G9QMJ9
LinkDB
All DBs
Position
complement(2650518..2652653)
Genome browser
AA seq
711 aa
AA seq
DB search
MNVIKKSFDLGDGRIVEIETGKLAKQADGSVVVKMGDTMLLATVVSTVGAKPGTDFLPLS
VDYQEKYAATGRIPGGFLRREARLSDYEVLISRLVDRALRPMFPSDYHSDTQVMISLISA
DKNIMPDCLAGLAASAALSVSDIPFNGPISEVRVAKIDGKLIINPKASELERATLEFMVA
GSANDIGMVEGECDEIQEDEMVEALKFAHDAIKVQCAIQVELTEATGKTVKREYNHEDHD
ADLKAKVYADTYDKVYAVAKAGGNKDVRKEGFTAIINEFFEAMPEDTADLTKAMAKHYYH
DVQYDAIRNLLLDEGIRLDGRKTTEIRPIWSEVGYLPAAHGSAVFTRGETQSLTSVTLGS
KDDEQMIDGAFFNGYNKFLLHYNFPGFSTGEVRPNRGAGRREIGHGALAQRSLKKVLPQG
EANPYTIRIVSDILESNGSSSMATVCAGTLALMDAGIKIKSPVSGIAMGLITDEKTGKYA
ILSDILGDEDHLGDMDFKVTGTEHGIVACQMDLKINGLSYEVLTKALLQAKEGRLHILNE
MKKTISSPNEDYKPHAPRIVSLTIDKEFIGAIIGPGGKIIQEMQRETGASISIEEVDGKG
IVEVFADNKAAIDAAVTRIRNIVAKPEIGEVYQGKVKSIMPFGAFVEVMPGKDGLLHISE
ISWERLETMDGVLKEGDKIEVKLLDIDKQGKMKLSRKVLLPRPEKPAAPQA
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtaataaaaaaatcgttcgatttgggcgatggcagaattgtagaaattgaaact
ggtaaattggctaaacaagctgatggttcggttgtggtaaaaatgggcgatacgatgttg
ttagcaacggtagtatcaactgttggtgctaaaccaggtactgattttttacctttatcg
gttgattatcaggaaaaatatgcggctacaggtcgtattccaggaggctttttacgtcgt
gaggcaagattatctgattacgaggtattaatctctcgtttagtggatagagctttacgc
ccaatgttcccaagtgattatcactctgatacgcaggtgatgatttctttaatctctgct
gataaaaatataatgcctgattgtttggcaggtttagcagcatcagctgcattatcggta
tctgatattcctttcaatggtccaatttctgaagtacgtgttgctaaaattgatggtaaa
ttaattatcaatcctaaagccagcgaattagaacgcgcaactttagagttcatggttgct
ggttcggccaacgatataggcatggttgaaggtgagtgcgacgaaattcaggaagacgaa
atggttgaagctttaaaattcgcacatgatgcaattaaagttcaatgtgccattcaggtt
gaattaactgaagctaccggcaaaacagttaaacgtgaatataaccacgaagaccacgat
gcagatttaaaagctaaagtttatgctgatacttacgataaagtttatgcggtagcgaaa
gctggtggtaataaagatgttcgtaaagaaggttttacagctattattaacgaattcttc
gaggcaatgccagaagatactgctgatttaaccaaagcaatggctaaacattattaccat
gatgttcagtacgatgccatcagaaatttattgctagatgaaggtatccgtttagatggt
cgtaagactacagaaatccgcccaatctggagcgaagtaggttatttacctgctgctcac
ggttcagctgtatttacacgtggcgaaactcaatctttaacatcggttactttaggtagc
aaagatgatgagcaaatgattgatggtgctttctttaatggttacaacaaattcttattg
cactataatttccctggtttctcaactggtgaggttagaccaaacagaggcgctggccgt
cgtgaaattggccacggtgctttagcacaacgttcgttgaaaaaagtattgcctcaaggt
gaagcaaatccttatactatccgtatcgtttctgatattttagaatctaacggttcatca
tcaatggcaactgtttgtgctggtacattagcattaatggatgcaggtattaaaatcaaa
tcgccggtttctggtatcgcaatgggtttaattactgatgagaaaactggtaaatacgca
atcctttctgatattttaggtgatgaagatcatttaggtgatatggactttaaagtaact
ggtactgaacatggtattgttgcttgtcaaatggacttaaaaatcaatggtttatcatac
gaggttttaactaaagctttattacaggctaaagaaggtcgtttgcacatcttaaacgag
atgaagaaaaccattagctcgcctaatgaagattacaaaccacacgctccacgtatcgta
tctttaactatcgataaagaatttatcggtgccattatcggccctggaggtaaaattata
caagaaatgcaacgcgaaaccggtgcttcaatctctatcgaagaagttgatggtaaaggt
atcgtagaggtatttgctgataacaaagcagctattgatgcagcggtcacccgtatccgt
aacattgttgctaaaccagaaattggtgaagtttatcagggtaaagtaaaatcaattatg
ccgtttggtgcatttgttgaggttatgccaggtaaagatggtttattacacatctctgaa
atttcatgggaacgtttagaaaccatggatggtgtattaaaagaaggtgataaaatcgag
gttaaattattagacatcgataaacaaggtaaaatgaaactttctcgcaaagttttattg
ccaagaccagaaaaaccagctgcgccacaagcatag
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