Pedobacter roseus: H9L23_14530
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Entry
H9L23_14530 CDS
T06980
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
proe
Pedobacter roseus
Pathway
proe02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
proe00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
H9L23_14530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
proe03021
]
H9L23_14530
Transcription machinery [BR:
proe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
H9L23_14530
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
GerE
Sigma70_ECF
HTH_40
DDB_G0281631_C
HTH_10
HTH_24
DUF722
HTH_5
DUF1492
TnsD
MarR
HTH_28
HTH_Tnp_ISL3
HTH_23
Fe_dep_repress
PhyR_sigma-like
Phage_terminase
HTH_3
HTH_7
HTH_37
Motif
Other DBs
NCBI-ProteinID:
QNN40367
UniProt:
A0A7G9QAJ2
LinkDB
All DBs
Position
3490769..3491332
Genome browser
AA seq
187 aa
AA seq
DB search
MILAKIANGDQQAFGSLFNFYRNKVYGYAYAILQVDTSSEEIVQDVFIKLWIKRQTLTNI
DNFGGFLRTIVKNETLNALKKIALTHKSHQIANLGATEIDLSTENAIQFRETKKLLDAAI
EKLPPQQKLVYNLCNIEGLKQKDVANQLNISPSTVKTHLRDAVKAIKNYLSTHDEVIAAP
LLLFFLK
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
ttgatcctggcaaaaattgccaatggagatcaacaggctttcggcagtctttttaatttc
tacaggaataaagtgtatggttatgcttatgccatccttcaagtcgatacttcctcagaa
gaaatagttcaggatgtttttataaaactctggatcaaaagacagactttaaccaacatt
gataattttggcggtttcttgagaacaatcgttaaaaatgaaacgcttaacgcattaaaa
aaaatcgcattaacacataaaagccatcaaattgcaaatttaggcgctacagaaattgat
cttagcacagaaaatgcaattcaattccgcgaaaccaaaaaattactagatgccgccatc
gaaaaactccctccgcaacaaaaattagtctataatttgtgcaatattgaaggattaaaa
caaaaagatgtcgcaaatcaactcaatatctccccttcaactgtaaaaacacacctaaga
gatgctgtaaaagcgattaaaaactacctttcaacccacgatgaggtaatagctgcacct
cttttgttattttttttaaaataa
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