KEGG   Pedobacter roseus: H9L23_14530
Entry
H9L23_14530       CDS       T06980                                 
Name
(GenBank) RNA polymerase sigma-70 factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
proe  Pedobacter roseus
Pathway
proe02020  Two-component system
Brite
KEGG Orthology (KO) [BR:proe00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    H9L23_14530
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:proe03021]
    H9L23_14530
Transcription machinery [BR:proe03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     H9L23_14530
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 GerE Sigma70_ECF HTH_40 DDB_G0281631_C HTH_10 HTH_24 DUF722 HTH_5 DUF1492 TnsD MarR HTH_28 HTH_Tnp_ISL3 HTH_23 Fe_dep_repress PhyR_sigma-like Phage_terminase HTH_3 HTH_7 HTH_37
Other DBs
NCBI-ProteinID: QNN40367
UniProt: A0A7G9QAJ2
LinkDB
Position
3490769..3491332
AA seq 187 aa
MILAKIANGDQQAFGSLFNFYRNKVYGYAYAILQVDTSSEEIVQDVFIKLWIKRQTLTNI
DNFGGFLRTIVKNETLNALKKIALTHKSHQIANLGATEIDLSTENAIQFRETKKLLDAAI
EKLPPQQKLVYNLCNIEGLKQKDVANQLNISPSTVKTHLRDAVKAIKNYLSTHDEVIAAP
LLLFFLK
NT seq 564 nt   +upstreamnt  +downstreamnt
ttgatcctggcaaaaattgccaatggagatcaacaggctttcggcagtctttttaatttc
tacaggaataaagtgtatggttatgcttatgccatccttcaagtcgatacttcctcagaa
gaaatagttcaggatgtttttataaaactctggatcaaaagacagactttaaccaacatt
gataattttggcggtttcttgagaacaatcgttaaaaatgaaacgcttaacgcattaaaa
aaaatcgcattaacacataaaagccatcaaattgcaaatttaggcgctacagaaattgat
cttagcacagaaaatgcaattcaattccgcgaaaccaaaaaattactagatgccgccatc
gaaaaactccctccgcaacaaaaattagtctataatttgtgcaatattgaaggattaaaa
caaaaagatgtcgcaaatcaactcaatatctccccttcaactgtaaaaacacacctaaga
gatgctgtaaaagcgattaaaaactacctttcaacccacgatgaggtaatagctgcacct
cttttgttattttttttaaaataa

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