Pedobacter roseus: H9L23_18740
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Entry
H9L23_18740 CDS
T06980
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
proe
Pedobacter roseus
Pathway
proe02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
proe00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
H9L23_18740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
proe03021
]
H9L23_18740
Transcription machinery [BR:
proe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
H9L23_18740
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
GerE
DUF1492
PhyR_sigma2
HTH_23
DSBA
DUF2523
HTH_24
WHD_HrcA
Motif
Other DBs
NCBI-ProteinID:
QNN41136
UniProt:
A0A7G9QCR1
LinkDB
All DBs
Position
complement(4567616..4568182)
Genome browser
AA seq
188 aa
AA seq
DB search
MESNDTNLIRLIKSGNKQAFDEVFLKHFKSLHAYAFTIIKEKDDAEEIVQNVFVRIWTKR
EQLKTDGFLKSFLYRSVHNESLNYLKHQKVRSNFNIHYANAVKNDTGNLNTEIMATELEK
NIHSAINELPEKCRNVFQLSRFDQMKYQEIADALNISIKTVENQMGKALKILRLRVVDFL
ILIFLLLK
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atggaaagtaacgatactaatcttatccgattaattaaaagcggtaataaacaggctttc
gacgaagtgtttttaaagcatttcaaaagtctgcatgcctatgcttttaccataattaaa
gaaaaagatgatgctgaagagattgttcagaatgtgtttgtacgcatctggacaaaaaga
gaacaacttaaaaccgatggatttttaaaatcatttctctatcgttcggtacacaacgaa
agtctaaattatttgaagcatcaaaaagtgagatcaaattttaacattcactatgccaat
gctgtgaaaaacgatacaggaaatttaaatacggagatcatggcaacagaactggaaaag
aatattcattcggcaataaacgagctgcctgaaaaatgcagaaatgtatttcagttaagc
aggttcgaccagatgaaataccaggaaattgctgatgcactaaatatttctatcaaaacg
gtagaaaatcagatggggaaagcattaaagattttacgccttagggtagtagattttcta
atcctaatttttttattattgaaataa
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