KEGG   Pedobacter roseus: H9L23_18740
Entry
H9L23_18740       CDS       T06980                                 
Name
(GenBank) RNA polymerase sigma-70 factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
proe  Pedobacter roseus
Pathway
proe02020  Two-component system
Brite
KEGG Orthology (KO) [BR:proe00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    H9L23_18740
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:proe03021]
    H9L23_18740
Transcription machinery [BR:proe03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     H9L23_18740
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF GerE DUF1492 PhyR_sigma2 HTH_23 DSBA DUF2523 HTH_24 WHD_HrcA
Other DBs
NCBI-ProteinID: QNN41136
UniProt: A0A7G9QCR1
LinkDB
Position
complement(4567616..4568182)
AA seq 188 aa
MESNDTNLIRLIKSGNKQAFDEVFLKHFKSLHAYAFTIIKEKDDAEEIVQNVFVRIWTKR
EQLKTDGFLKSFLYRSVHNESLNYLKHQKVRSNFNIHYANAVKNDTGNLNTEIMATELEK
NIHSAINELPEKCRNVFQLSRFDQMKYQEIADALNISIKTVENQMGKALKILRLRVVDFL
ILIFLLLK
NT seq 567 nt   +upstreamnt  +downstreamnt
atggaaagtaacgatactaatcttatccgattaattaaaagcggtaataaacaggctttc
gacgaagtgtttttaaagcatttcaaaagtctgcatgcctatgcttttaccataattaaa
gaaaaagatgatgctgaagagattgttcagaatgtgtttgtacgcatctggacaaaaaga
gaacaacttaaaaccgatggatttttaaaatcatttctctatcgttcggtacacaacgaa
agtctaaattatttgaagcatcaaaaagtgagatcaaattttaacattcactatgccaat
gctgtgaaaaacgatacaggaaatttaaatacggagatcatggcaacagaactggaaaag
aatattcattcggcaataaacgagctgcctgaaaaatgcagaaatgtatttcagttaagc
aggttcgaccagatgaaataccaggaaattgctgatgcactaaatatttctatcaaaacg
gtagaaaatcagatggggaaagcattaaagattttacgccttagggtagtagattttcta
atcctaatttttttattattgaaataa

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