Pedobacter roseus: H9L23_18890
Help
Entry
H9L23_18890 CDS
T06980
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
proe
Pedobacter roseus
Pathway
proe00061
Fatty acid biosynthesis
proe00071
Fatty acid degradation
proe01100
Metabolic pathways
proe01212
Fatty acid metabolism
proe02024
Quorum sensing
proe04146
Peroxisome
Module
proe_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
proe00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
H9L23_18890
00071 Fatty acid degradation
H9L23_18890
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
H9L23_18890
09145 Cellular community - prokaryotes
02024 Quorum sensing
H9L23_18890
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
proe01004
]
H9L23_18890
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
proe04147
]
H9L23_18890
Enzymes [BR:
proe01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
H9L23_18890
Lipid biosynthesis proteins [BR:
proe01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
H9L23_18890
Exosome [BR:
proe04147
]
Exosomal proteins
Exosomal proteins of breast milk
H9L23_18890
Exosomal proteins of breast cancer cells
H9L23_18890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Stirrup
Motif
Other DBs
NCBI-ProteinID:
QNN41165
UniProt:
A0A7G9QCU0
LinkDB
All DBs
Position
complement(4604495..4606270)
Genome browser
AA seq
591 aa
AA seq
DB search
MAAEIKRVFDLLKYSLENPKQEFISGKVSGKWINYSTVDFCDAVDQLSRGLIKQGITKGG
RVAVMSHNRPEWNIADFAANQIGAYQIPLYPTLAEHDIEFILKDAEISIIFVADEELYKK
IKPCADAINPNIKIYSFNEIPEAENWTTLIELGKANSDINLDEYRAKVAPEDILTLIYTS
GTTGTPKGVMLTHNNLVANFVNSSVVMPEGVKKGLSFLPLSHIFERMIIYLYLFNYTAIY
YAESMDTIVADIQHVKPNAFSTVPRLLEKVYDKIMEKGKALTGVKKGIFFWSVALAEKYT
INAGGWYNFKLGIARKLVFKKWQEALGGEIVVIVSGGAALNPRLARIFWAAGMPVFEGYG
LTETSPVITVNHFGGTMFGTVGEVIKGVEVKIAQDGEVLTRGHQVMKGYYNRPDLTDEAV
DKDGWFHTGDIGELVDGRFLKITDRKKEMFKTAGGKYVAPQMLENKYKESIFIEQIMVLG
ENRKFPSALIVPNFETLKTWAGRKGITFTTNEEMIKNEQVLAKYNEVIEASNVGFGKWEQ
VKRFALLPKEWSIDGGELTPKLSLKRKVITEKNNEVIEKIYKDAENYKAPH
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagaaattaaacgggtttttgatcttttgaaatacagcctcgaaaatccaaag
caagagttcatcagcggaaaagttagcggaaaatggataaattatagtacagtcgatttt
tgtgatgctgtagatcaactaagccgtggattgattaagcagggcattaccaaaggtggt
agagtagcggtaatgtcgcacaacagacccgaatggaatattgcagattttgcagccaac
cagattggtgcctatcagattccgctgtacccaacacttgccgaacacgacattgaattt
atattaaaggatgcagagatttcgatcattttcgtcgctgatgaagaattgtataaaaaa
attaaaccctgtgctgatgccataaaccccaatatcaaaatttatagttttaatgaaatt
cccgaagccgaaaactggactacattaatcgaactgggtaaagccaacagtgatatcaat
ctggatgaataccgcgctaaagtggctcccgaagatattttaactttaatctatacttcc
ggaactacaggtactccaaaaggggtaatgctaacgcacaataacctggtggcaaacttt
gtaaactcgtctgtggtaatgcccgaaggtgttaaaaaaggcctcagctttttgccgctc
tcgcacattttcgaacggatgatcatttatctgtacttatttaattacaccgctatttat
tatgccgaaagtatggataccatcgtggccgatattcagcatgtaaagccaaatgcattc
tctaccgttccacgtctgctcgaaaaagtatacgataagattatggaaaaaggcaaggca
ttaacgggcgttaaaaaaggaattttcttttggtcggtggccttggccgaaaaatatacc
attaatgcgggtggctggtataattttaaacttggtattgcccgtaaactggtttttaaa
aaatggcaggaagcacttggtggtgagattgtagtgatcgtatcgggcggagcagcatta
aacccacgtttggccagaattttctgggcagcaggtatgccggttttcgaaggttatggc
ttaaccgaaacctcgcctgtaattaccgttaaccatttcggtggaaccatgttcggaacc
gtaggcgaggtaattaaaggtgtggaagttaaaattgcgcaagatggtgaagtattaacc
cgaggtcaccaggtgatgaaaggttattataaccgtcctgatttaaccgatgaagctgta
gataaagacggttggttccataccggggatatcggcgagctggttgatggccgtttctta
aaaattaccgaccgtaaaaaggaaatgtttaaaacagcaggtggtaaatacgtagcacca
caaatgctggagaataaatataaagaatcgatttttatcgaacagattatggtattgggc
gaaaatagaaaattcccgtcggccttaatcgttccaaattttgaaaccttaaaaacctgg
gcgggcagaaaaggaattacttttaccacaaacgaagaaatgatcaaaaacgagcaggtg
cttgccaaatataatgaagtgattgaagcttcaaatgtgggttttggtaaatgggaacag
gtaaaaagatttgccttattgccaaaagaatggagcatagatggtggagaacttaccccc
aaattaagcttaaaaagaaaagtgattactgaaaaaaacaatgaggtgatcgaaaaaata
tacaaggatgcagaaaactataaagcccctcattaa
DBGET
integrated database retrieval system
