KEGG   Pedobacter roseus: H9L23_19935
Entry
H9L23_19935       CDS       T06980                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
proe  Pedobacter roseus
Brite
KEGG Orthology (KO) [BR:proe00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    H9L23_19935 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:proe03019]
    H9L23_19935 (rnc)
   03009 Ribosome biogenesis [BR:proe03009]
    H9L23_19935 (rnc)
   03036 Chromosome and associated proteins [BR:proe03036]
    H9L23_19935 (rnc)
Enzymes [BR:proe01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     H9L23_19935 (rnc)
Messenger RNA biogenesis [BR:proe03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     H9L23_19935 (rnc)
Ribosome biogenesis [BR:proe03009]
 Eukaryotic type
  90S particles
   RNase
    H9L23_19935 (rnc)
 Prokaryotic type
  rRNA processing factors
   H9L23_19935 (rnc)
Chromosome and associated proteins [BR:proe03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     H9L23_19935 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase DSRM_2
Other DBs
NCBI-ProteinID: QNN41364
UniProt: A0A7G9QDD9
LinkDB
Position
4859313..4860041
AA seq 242 aa
MPILKLYKLYLSPEKEFVKKLKNILGFVPGNVTLYKMAFRHRSVAKVLKNGSRSSNERLE
FLGDAVLGSVIAELLFKHYPYKEEGFLTEMRSKIVNRANLNQLAKKIGFDKLIQFDQRSV
SIQTKHNSMLGDAFEAIIGAIYMDKGYNFTKEFLLRRIVKPHIDIHTLELTETNFKSKLI
EWCQRHGKDVMFELAENGEGESAKLFTISAVVEGEKVGTGRDYNKKNAEKLAAEKACEAL
SI
NT seq 729 nt   +upstreamnt  +downstreamnt
atgccgatcttaaaattatataaactttatctctctcccgaaaaggagtttgttaaaaag
ctgaaaaacattttaggctttgttcctgggaatgttacgctttataaaatggcgttcagg
caccgttctgtagcaaaagttttaaaaaacggaagcagaagcagcaacgagcgcttagaa
tttcttggagatgctgttctgggctcggttatagccgagctgctttttaaacattatccg
tacaaagaagaaggtttcctgaccgaaatgcgttcaaaaatcgtaaaccgcgccaattta
aatcaattggcgaaaaaaatcggtttcgataagcttatccagttcgatcagcgctcggtg
agtatacaaaccaaacacaattcgatgttgggcgatgcttttgaagccattataggtgcc
atttatatggacaaaggctacaattttaccaaagaatttttgttgcgcagaatcgtaaaa
ccacatatcgatatccacaccttagagcttactgaaaccaatttcaaaagtaaactgatt
gaatggtgccaacgccatggtaaggacgttatgttcgaactggcagaaaacggtgaaggc
gaaagcgcaaaactatttaccatcagtgccgtagtagaaggcgaaaaagtaggcaccgga
agagattacaacaagaaaaacgcagaaaaattagcggcagagaaggcttgtgaagcgttg
agtatttag

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