Pedobacter roseus: H9L23_20540
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Entry
H9L23_20540 CDS
T06980
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
proe
Pedobacter roseus
Pathway
proe00521
Streptomycin biosynthesis
proe00523
Polyketide sugar unit biosynthesis
proe00525
Acarbose and validamycin biosynthesis
proe00541
Biosynthesis of various nucleotide sugars
proe01100
Metabolic pathways
proe01110
Biosynthesis of secondary metabolites
proe01250
Biosynthesis of nucleotide sugars
Module
proe_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
proe00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
H9L23_20540 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
H9L23_20540 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
H9L23_20540 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
H9L23_20540 (rfbB)
00525 Acarbose and validamycin biosynthesis
H9L23_20540 (rfbB)
Enzymes [BR:
proe01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
H9L23_20540 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
NAD_binding_10
NmrA
Motif
Other DBs
NCBI-ProteinID:
QNN41471
UniProt:
A0A7G9QDP6
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All DBs
Position
complement(4996255..4997307)
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AA seq
350 aa
AA seq
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MKKILITGGAGFIGSHVVRRFVNNYPGYEIVNLDKLTYAGNLANLTDIENKPNYRFVKED
ITDASAMFDLFKTENFDAVIHLAAESHVDRSISDPTAFVITNVIGTVNLLNAAREYWKGD
YDKKRFYHVSTDEVYGALGEEGMFTETTAYDPHSPYSASKASSDHFVRAYHDTYGMDCVI
SNCSNNYGSHHFPEKLIPLAINNIKNNKPVPVYGKGENVRDWLWVEDHARAIDVIFHNSK
TGDTYNIGGHNEWKNIDLINLLCTIMDQKLGREAGESAKLITYVTDRAGHDLRYAIDSSK
LQNQLDWVPSLQFEEGLAKTVDWYLQNEDWLNNVTSGNYQSYYEQQYSTK
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaaaatcttaatcactggtggtgcgggctttattggctctcatgtagtccgccgt
ttcgtcaataactatcctggatacgaaatcgtcaatttagataagcttacctatgctggt
aatctggctaacttaaccgatattgaaaataagccaaattatagatttgttaaagaagac
atcacagatgcttctgcaatgtttgatctgttcaaaacagaaaactttgatgcagttatt
caccttgcagcagaaagccacgtagatcgttctatctccgatcctacagcttttgtgatt
accaatgtaattgggaccgtaaatttattaaatgctgcacgcgaatattggaaaggtgat
tatgataaaaaacgcttttaccacgtgagtaccgatgaggtatatggtgcgttaggtgaa
gaaggtatgtttactgaaacaaccgcttacgatccgcatagtccatactcggcctcaaaa
gcaagctctgatcattttgtgagggcatatcacgatacctatggcatggattgcgtaatt
tcaaattgctctaacaattatggctcgcatcattttccagagaaactgattccattagcc
atcaataatatcaaaaataacaaacctgttccagtttatggtaaaggtgaaaacgtgcgc
gattggttatgggtagaagatcatgccagggcaatcgacgtgattttccataattcaaaa
actggggatacttataatattggcggacataacgagtggaagaatattgacctgatcaat
ttactttgtaccatcatggatcaaaagttaggccgcgaagcaggtgaatcagccaaactg
attacctatgtaactgaccgggctggtcatgatttacgttatgccatagattctagtaag
ctgcaaaatcaactggattgggtacctagcctacagtttgaagaagggctagcgaaaacg
gttgactggtatttacaaaatgaagattggttaaacaacgtaacttctggcaattatcaa
tcttattacgaacaacagtacagtaccaaataa
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