Pedobacter roseus: H9L23_21460
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Entry
H9L23_21460 CDS
T06980
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
proe
Pedobacter roseus
Pathway
proe03030
DNA replication
proe03410
Base excision repair
proe03420
Nucleotide excision repair
proe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
proe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H9L23_21460 (polA)
03410 Base excision repair
H9L23_21460 (polA)
03420 Nucleotide excision repair
H9L23_21460 (polA)
03440 Homologous recombination
H9L23_21460 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
proe03032
]
H9L23_21460 (polA)
03400 DNA repair and recombination proteins [BR:
proe03400
]
H9L23_21460 (polA)
Enzymes [BR:
proe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
H9L23_21460 (polA)
DNA replication proteins [BR:
proe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
H9L23_21460 (polA)
DNA repair and recombination proteins [BR:
proe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
H9L23_21460 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H9L23_21460 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
HHH_5
DUF3913
HHH
Motif
Other DBs
NCBI-ProteinID:
QNN41643
UniProt:
A0A7G9QE68
LinkDB
All DBs
Position
5207382..5210189
Genome browser
AA seq
935 aa
AA seq
DB search
MNKKLFLLDGMALMYRAHFALSKNPRFTSTGINTSAVMGFTNTLLDVLKKEKPTHIAVVF
DTEAPTERHTSFEAYKAHRQAMPEDLAAAMPYVIKLITGFNIPVITSDGYEADDIIGTLA
KKAELKGYQVYCMTPDKDFAQLVSENIFIYKPARMGNDMEILGVKEILAKWEIENVLQVI
DILGLWGDAVDNIPGIPGIGEKTAKALIKQYGSMENIIANSHELKGKQRENVENFAEQGL
ISKKLATILLDVPVELDEASLELCDPSRDLLEPLFTELEFRTLGRRVFGDEFSVTTARFQ
EGTQTDLFGNQSGEAIQYTNTLEEEPAEKLPAKTIENTEHDYQLIDTAEQRADLIKLLLA
EKRISFDTETTGTDANMADLVGLSFSIKPGTGYYIPVPAEREEAQLIVDEFRVVLENEAI
EKIGQNTKYDILVLKWYGIQVQGKLFDTMLAHYLIDPDTRHGMDVLSENYLGYSPISITK
LIGAKGKNQGTMRDVPVIDVVDYAAEDADVTLQLAHIFEPKLKELNAAKLAEEIENPLVY
VLADIEKEGVRIDIETLQAYSKELETEIVKFEQNVYDKAGIKFNLASPKQLGEVLFDKLQ
LDPKAKKTKTGQYQTGEDVLMALASKSDIVQDILDFRQLQKLKSTYVDALPLMVNPKTGR
VHTSYNQAVAATGRLSSNNPNLQNIPIRTERGREVRKAFIARDENHILLSADYSQIELRI
IAEISKEENMLDAFSKGIDIHTATAAKVYGVSIEEVDGTQRRNAKAVNFGIIYGQSAFGL
SQNLGIPRKEAAEIIEQYFAQYPGIKRYMSDTMNFARENGFVETIMGRRRYLRDINSANQ
TVRGFAERNAINAPIQGSAADMIKIAMINIHKEMKVQNLQSTMTMQVHDELVFDVVRSEK
EVMKAIIQDKMANAIKLTVPIVVEIGEGDNWLAAH
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaaactctttctcctagacggtatggcgctaatgtacagggcgcattttgca
ttaagtaaaaacccgcgttttacgtcaacaggtatcaatacatcggcagtaatgggcttt
accaatactttattagatgttttgaagaaagaaaaaccaacacatattgcagtggttttt
gatactgaagcaccaacagaaagacatacctccttcgaagcttataaagcacaccgtcag
gccatgcctgaggatctggctgctgcaatgccttatgtgattaaattaattaccggtttt
aatattcctgtgatcacttctgatggttatgaggctgatgatattattggtacactggcc
aaaaaagcagaactaaagggttatcaggtctactgcatgacaccggataaagattttgca
caattggtttcagaaaatatttttatctacaaacctgcccgtatgggtaacgatatggaa
atattgggcgtaaaggaaatattggccaaatgggagatcgaaaatgtattgcaggtaatc
gatattttaggtttgtggggcgatgccgttgataatatcccgggtatccctggtattgga
gagaaaacggcaaaagctttgatcaaacaatatggttcaatggagaacattattgccaac
tcacacgaattaaaaggcaaacaacgcgaaaacgtagaaaactttgcagaacaaggactg
atctccaaaaaactggcgactatcttattggatgttcccgttgaacttgatgaggccagc
ctggaactttgcgatccgagccgcgacttgctggaaccattattcacagaattagaattc
agaactttaggccgaagggtatttggagatgaattttcggttaccacggcacgttttcag
gaaggtacccaaaccgatctttttggcaatcaatcgggagaggccatacaatataccaat
acacttgaggaggaaccggcagaaaaacttccggccaaaaccatcgaaaatacggaacac
gattaccaattaattgatactgctgagcagcgtgccgatttaattaaattattacttgcc
gaaaaacggatctcgtttgataccgaaaccaccggcactgatgcaaacatggccgattta
gtgggtttatcattctcgataaaacccggcacaggttattatatccctgttcctgcagaa
agggaagaagcgcagcttattgttgacgaatttagggtggtattggaaaatgaggccatc
gaaaaaatcggtcagaataccaaatacgatatactggtgttaaagtggtatggcattcag
gtacaaggtaaacttttcgatacgatgctggcccactacttaatcgatcctgatacccgc
catggtatggatgtgttgtcagaaaattacctgggttattcgccaatttcgataaccaaa
ctaatcggtgcaaaaggcaaaaaccagggcaccatgcgtgatgtgccggtaattgatgtg
gttgattatgccgctgaagacgccgatgttaccttacagttagcccacatttttgagcca
aaattaaaagaattaaatgccgccaaactggccgaagaaattgaaaatcctttggtttat
gtattggccgatattgaaaaagaaggtgtacgcattgatatcgaaaccttacaggcttac
tctaaagagcttgaaactgaaatcgtcaaattcgaacagaatgtttacgataaagccggg
attaaatttaacctggcctcgccaaaacagttaggtgaggtgctgtttgataaacttcag
cttgacccgaaagccaaaaagaccaaaacaggtcagtaccagaccggagaagacgtttta
atggctttagcaagtaaaagtgatattgtacaggatattttagatttccgccagttacag
aagcttaaatcaacctatgtggatgctttaccattaatggttaacccgaaaactggtagg
gtacacacttcttacaaccaggccgtagctgctaccggcaggttgagttctaacaatccg
aatttacagaacatcccgatccgtaccgaacgtggcagggaggtccgtaaagcctttatt
gcaagagatgaaaaccatatcctgttatcagccgattattctcagattgaacttcgcatt
atcgcggaaatcagtaaagaggaaaatatgcttgatgcatttagcaaagggattgatatc
cacacggctacggcagctaaagtatatggcgtaagcattgaagaggtagatggaacccag
cgtagaaatgcaaaagcagttaactttggtattatttacggtcaatcggcttttggttta
tctcagaacctgggtattccacgtaaagaggcggcagaaattatcgaacaatattttgcg
caatacccaggcattaaacggtacatgagcgataccatgaattttgcgcgggagaatgga
tttgtagaaacgataatgggcagaagacgctatttaagagacattaactcggccaaccaa
acggtaaggggttttgcagaacgaaatgcgattaacgcgcctatacagggctctgctgcc
gatatgattaagattgccatgatcaatatccataaagaaatgaaagtgcagaatttgcaa
tcaaccatgaccatgcaggtgcatgatgagttggtgtttgatgtagtccgttcagaaaaa
gaagtgatgaaagccatcattcaggataaaatggccaatgccattaaattaacggtgcct
attgtagtagaaattggagagggcgataactggctggctgcacactaa
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