Pedobacter roseus: H9L23_23800
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Entry
H9L23_23800 CDS
T06980
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
proe
Pedobacter roseus
Brite
KEGG Orthology (KO) [BR:
proe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
proe02000
]
H9L23_23800
Transporters [BR:
proe02000
]
Other transporters
Pores ion channels [TC:
1
]
H9L23_23800
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OmpA
OMP_b-brl
TSP_3
DUF6089
RACo_linker
NPV_P10
Motif
Other DBs
NCBI-ProteinID:
QNN42081
UniProt:
A0A7G9QFF6
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Position
5748273..5749619
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AA seq
448 aa
AA seq
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MNYSTLKKSVALSLVALTGVASLAVAQDAPATTSAVKVFGGRGQYRTWSIGVHGGVLMPV
VAIGGTNDFNKWDANLGYGLNIRKQLGHSFGLELNGTRGKLSGTNEGISNPAVKDFETEL
QYAVDLRGVVNVGSIDFLRRENSVGFFLTAGAGYMAYAPKITLANGSQIDWKGKAVGPAD
DRHDAKDYVKGFYIPVGAGVKFKVSERVNFNLGYTMNFVDADNLDGVYAKGQTKDKFSYG
YAGLEFSLGSSAKPSLEWTNPLATMYDELKDPTLRQEVEALKNRVSAVEKSVEDLKKDTD
GDGVADQFDKCPGTPAGTAVDGSGCPLPKAPEPTAATSNVTGFEKIAFDFNSSVLKTESY
PTLDKLSSVLRENGGKVTVNGYASSEGTAAYNLKLSKDRANSVKTYLVNSGVTASQVATK
GNGEANPIASNDTEEGRIQNRRVETARN
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgaattattctactttaaagaaaagtgttgcgctttctttagtggcattaacaggagtt
gcttctcttgctgtcgctcaggatgctcctgcaaccacttctgctgtcaaggtatttggc
ggtagaggacagtacagaacttggtctatcggtgtacacggtggtgttttaatgccagtt
gtagctatcggtggtactaacgactttaacaaatgggatgctaacttaggttacggttta
aacatccgtaaacaattaggtcactcattcggtttagaattaaacggaacacgtggtaaa
ctttctggtactaacgaaggtatttctaacccagctgtgaaagatttcgaaactgaatta
caatatgctgtagatttacgtggtgttgttaacgtaggttctatcgatttcttacgtcgt
gagaactcagtaggtttcttcttaactgctggtgctggttatatggcttatgctccaaaa
atcactttagcaaatggttcacaaatcgactggaaaggtaaggctgtaggtcctgctgat
gacagacatgatgctaaagattacgtaaaaggtttctacattccagttggtgctggtgtt
aaattcaaagtttctgagcgtgttaactttaacttaggttacactatgaactttgttgat
gctgataacttagacggagtttatgcaaaaggtcaaactaaagataaattctcttacggt
tatgctggtttagaattctctttaggttcttctgctaaaccaagtttagagtggactaac
ccattagctacaatgtacgatgagttaaaagatccaactttacgtcaagaagttgaagcg
ttgaaaaaccgtgtttctgctgttgagaaatctgttgaagatttgaaaaaagatactgac
ggtgacggtgttgctgatcaattcgataaatgcccaggtactcctgcaggtactgctgtt
gatggttcaggttgtcctcttccaaaagcaccagagcctactgctgctactagcaatgta
actggtttcgaaaaaatcgctttcgatttcaactcttcagtattaaaaactgagtcttac
cctactttagataaattatcttcagtgttacgtgaaaacggtggtaaagtaactgtaaac
ggttacgcttcaagcgaaggtactgctgcatataacttgaaattatctaaagacagagct
aactctgttaaaacttacttagtaaactctggcgtaactgctagtcaagttgctactaaa
ggtaatggtgaagctaacccaattgcttcaaacgatactgaagaaggtcgtatccaaaac
cgtcgtgttgaaactgctagaaactag
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