KEGG   Pedobacter roseus: H9L23_24240
Entry
H9L23_24240       CDS       T06980                                 
Name
(GenBank) RNA polymerase sigma-70 factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
proe  Pedobacter roseus
Pathway
proe02020  Two-component system
Brite
KEGG Orthology (KO) [BR:proe00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    H9L23_24240
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:proe03021]
    H9L23_24240
Transcription machinery [BR:proe03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     H9L23_24240
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r4 Sigma70_r2 GerE HTH_24 HTH_Tnp_ISL3 Sigma70_ECF Xre-like-HTH HTH_11 MarR_2 HTH_28 TackOD1 HTH_23
Other DBs
NCBI-ProteinID: QNN42162
UniProt: A0A7G9QFN7
LinkDB
Position
5853790..5854368
AA seq 192 aa
MSSYQTLSDHELFVLMQDGDKYAFEEIYERFNGLLYIYACKMVPDREDARDIVQEIFVYL
WSNPNIKIKSQLSGYLYTAVRYKVFDWLDKNKSRSNYLQSLENFADQGDYVTDNYIRERE
FASIIEKEVSLLPPKMRLIFEMSRQQHLSQKEIADILHLSDKTVKKQMSNALKVLRLKLT
SFLLLAIILMIR
NT seq 579 nt   +upstreamnt  +downstreamnt
gtgtcatcatatcaaacattaagcgatcacgaacttttcgtcctgatgcaggatggggat
aagtatgcgttcgaagaaatttacgaacggtttaacggtttgttatatatctatgcctgc
aaaatggtacccgatagggaagatgcaagggatattgtgcaggaaatttttgtatacctc
tggagcaaccctaatattaaaatcaaatcacagttatcaggctatctttatactgcagtg
aggtataaagttttcgattggctggataaaaataaatcgcgttccaattatttacaatca
ttggaaaattttgccgatcagggcgattatgttaccgataactatatccgtgaacgcgaa
tttgcttcaattattgaaaaggaagtatcgttactaccgcctaaaatgcgcctcatcttc
gaaatgagccgccagcagcaccttagccagaaagaaattgccgatattttgcatttatca
gataaaacggtaaaaaaacaaatgagcaatgcacttaaggttttgaggctaaaactcact
tcgtttttattgctggccataattttaatgatccgttga

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