Pedobacter roseus: H9L23_25995
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Entry
H9L23_25995 CDS
T06980
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
proe
Pedobacter roseus
Brite
KEGG Orthology (KO) [BR:
proe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
proe03009
]
H9L23_25995
Enzymes [BR:
proe01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
H9L23_25995
Ribosome biogenesis [BR:
proe03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
H9L23_25995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
QNN42481
UniProt:
A0A7G9QGK6
LinkDB
All DBs
Position
complement(6255942..6257525)
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AA seq
527 aa
AA seq
DB search
MINKNNRNSRDDKSKPGSRRTEGRSSSAGSDRKRSDDKDSKFKKSSDSKEGFRPRSADSK
DFKSKSFGDKKDFKPRSGGRDFKSKDSEPQSFKFGDREFKSKDAASEDRGFKPREGKSRD
YKPRTGDRDFKPREGGSRDYKPRTGDRDFKPREGGARDYKPRTGERDFKSKDGDSRDFKP
RTGDRDFKPREGGSRDYKPRTGDRDFKSKDGGSRDFKPREGGYKDYKSRGKSDDFKPSAG
SSRDVKPREPKEGDTRPFRKREDAQPRDTEFNRPERTVITQGRKTNEDKGLIRLNRYISN
AGICSRRKADELIIAGIITVNGEAVTELGHKVDPAKDLVRYNGELLKREKKVYVLLNKPK
DYITTTDDPQERRTVMQLVDKASRERIYPVGRLDRNTTGLLLMTNDGDLADKLSHPKNGI
TKIYNVELDKSLSQGDLNKIAFGLELEDGLIKPDNISYVAGGTKKEIGIQIHSGKNRIVR
RIFEHLGYNVEKLDRVVYGNLTKKDLPRGRWRYLEEHELIQIKHLIK
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgataaataaaaacaacaggaacagtcgggatgacaagtccaaaccaggcagtcggaga
acagaaggcagaagtagttcggccgggtctgacagaaaaagatcagacgacaaagacagc
aaattcaaaaaatcatccgattcaaaagaaggcttcagacccagaagcgcagacagtaaa
gatttcaaatcaaaatctttcggagacaaaaaagatttcaaaccaagatcaggcggacgt
gatttcaaatcgaaagattcggaaccacagagtttcaaattcggcgatcgcgagtttaaa
tcaaaagatgcagcatcagaagaccgtggctttaaaccgagagaaggtaaatcgagagat
tacaaaccgagaaccggcgaccgtgatttcaaaccgagagaaggtggatcaagagattac
aaacctagaacaggagacagggattttaaaccaagagaaggtggtgcaagagattataag
ccaagaacaggagaacgcgatttcaaatctaaggatggagattcgagagattttaaaccg
agaactggcgaccgcgactttaaacctagagaaggcggatcgagagattacaaaccaaga
acgggcgaccgtgatttcaaatcgaaagatggtggatcgagagatttcaaacctagagag
ggtggctacaaagattacaaatcaagaggtaaatcagatgatttcaagccaagtgctgga
agttcaagagatgtaaaaccccgagagccaaaggaaggcgacacccgtccgtttagaaaa
cgcgaggacgcacagccaagagatacagaatttaaccgcccggagcgcactgtaattacc
caaggccgtaaaacaaatgaagataaaggcttaatccgcctaaacagatatatttcaaat
gcaggcatctgctctcgtcgaaaagccgatgagctaattattgccggtattattaccgta
aacggcgaagctgttaccgagctgggacataaagttgaccctgcaaaggatttggttcgt
tacaatggcgaattattaaaacgcgagaaaaaagtttacgttttattaaacaaaccaaaa
gattacatcaccactaccgacgatccacaggaacgccgtacggtaatgcaactggttgat
aaagcgagtcgtgagcgtatttacccggttggacgtttagaccgcaataccacaggtttg
ttgttaatgacaaacgatggtgatttagccgataaattatcacaccctaaaaacggtatc
actaaaatttacaatgttgaattggataaatctttatcacaaggcgatttaaataaaatt
gcttttggtttagaattagaagatggcctgatcaaacctgataacatttcttacgttgca
ggtggaaccaagaaagaaatcggtatccagatccacagtggaaaaaacaggattgttcgt
cgtatttttgaacacttaggttacaatgtagaaaaattagaccgcgtagtttatggcaat
ttaaccaagaaagatctaccacgcggtagatggcgctatcttgaagagcatgaactgatt
cagattaaacatttaattaaataa
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