Prosthecochloris sp. SCSIO W1103: OO005_00270
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Entry
OO005_00270 CDS
T09697
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
proi
Prosthecochloris sp. SCSIO W1103
Pathway
proi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
proi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OO005_00270 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
proi03019
]
OO005_00270 (recQ)
03400 DNA repair and recombination proteins [BR:
proi03400
]
OO005_00270 (recQ)
Enzymes [BR:
proi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OO005_00270 (recQ)
Messenger RNA biogenesis [BR:
proi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
OO005_00270 (recQ)
DNA repair and recombination proteins [BR:
proi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
OO005_00270 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
DUF6106
Motif
Other DBs
NCBI-ProteinID:
UZJ37681
UniProt:
A0A9E8J438
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All DBs
Position
complement(58937..60805)
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AA seq
622 aa
AA seq
DB search
MTMDTLRPTRSQGEQPSLTAETKLLDTLQKVFGFHTFRKNQESIIQAILDRKDAFAVMPT
GGGKSLCYQLPALLLPGTCIVISPLIALMKDQVDGAKANGIRAAYLNSTLSAEEQSLVLK
DLQSNSLDLLYIAPERFALNHFQDMLKETNISMAVIDEAHCISEWGHDFRPDYLSLAALA
KLFPGTPIAAFTATATHKVQQDILDKLGLRNPFIIRASFDRPNLLYDIRFKENPNAQLAS
ILRNNSGKAGIIYRTSRKSVNETTAMLQAKGFRVLPYHAGLGDEERKKNQEAFIRDEVDV
IVATIAFGMGIDKSNIRFVIHADLPKSIENYYQETGRAGRDGEPAQCIMLFSQSDIPKVR
FFIDTMVDETERAKAQGALQRVISFASTSVCRRKTLLEYFGETYPHDNCNSCDICLGSRE
VVDCTVEAQMLLSAIARTEERFGATHIVDIVTGSKNKKIRDFGHDRLKTYGVGKTHGKKF
WRQLIDELMAQKIIAKSEGLYPALHIQEKAIPILKNKARVEMVRIKESPAPTAMTKGAGT
YDHDLFDQLRALRKQLADEQNIPPYIVFSDRSLRDMATLHPMNEDTMLSVSGVGEVKLQR
YGRQFLALIKRYCEEHPKKNER
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgacaatggacaccctgcgcccaactcgatcccaaggagagcagccctccttaaccgcc
gagacaaagctgctcgacacgctgcaaaaagtattcggattccatacgtttcgtaagaac
caggaatcgattatccaggctatactcgatcgaaaagacgcatttgccgtcatgccgacc
ggcggaggcaaatcactctgctatcaacttcctgcactactgcttcccggtacctgcatc
gtaatcagcccactgattgcactgatgaaggatcaggttgacggtgccaaggcaaacggt
atccgcgcagcgtatttgaacagcactctctctgcagaggagcaatccctagtcctcaaa
gacctgcagtctaattcactcgatctgttgtatatagcacctgagcggtttgcactcaac
cattttcaggacatgcttaaagagacgaatatcagcatggcggtaattgacgaagctcac
tgcatatccgaatggggtcatgattttcggcccgactacctttcactcgctgctttggcc
aagctttttcccggtacaccaatagctgcatttacagcaacagccacccacaaggtacag
caggatattctcgataaactcggcctgcgcaacccctttatcatcagagcctcctttgac
cgcccgaacctcctttacgacatccgcttcaaggaaaaccccaacgcccaacttgcctcg
atcctgagaaacaactccggcaaagccggcattatctaccgcaccagccgcaaaagcgtc
aacgagacaacagcgatgctccaggcaaaaggctttcgtgtactcccttaccatgcaggc
ctgggcgatgaagaacgaaagaaaaaccaggaagcattcattcgagacgaggtcgatgtt
atcgttgcaacgatagcgttcggtatgggtatcgataaatcgaacatacgttttgtcatt
catgccgacctgccaaaaagtattgaaaattattatcaggaaaccggcagggctggccgc
gacggggaacccgctcaatgcataatgctcttttcacaatcggacatccccaaagtccgt
tttttcatcgacacgatggtcgatgaaaccgaacgtgcaaaagcacaaggagcattgcaa
cgcgtgatatcatttgcttcgacatccgtttgcaggcggaaaaccctgctcgagtatttt
ggcgaaacgtaccctcacgacaactgcaattcctgcgatatctgccttggttcccgggaa
gtggttgactgcactgtagaggctcagatgctgctctccgcgatcgcccgaaccgaagaa
cgcttcggtgcgacacatatagtcgatattgtcacaggcagcaaaaacaaaaaaatccgt
gacttcggccatgaccgcctcaaaacatacggagtaggtaaaacgcacggcaaaaagttc
tggcggcagcttatcgacgaattgatggctcagaaaataatcgcaaaatccgaagggctc
tacccggcccttcacatacaggagaaagctattccgatactcaaaaataaggcaagggtt
gaaatggtacggataaaagaatccccagcgcctacagcaatgaccaagggagcaggaacc
tacgatcacgacctgttcgaccagctcagggcgcttcgtaaacaactcgctgacgaacag
aatattcctccctacattgtcttttccgaccgctcccttcgtgatatggccaccctccat
cccatgaacgaagacacaatgctttcagtgtcaggagtaggagaagtaaagctgcagcga
tatggaagacagtttctcgctctcatcaaaagatactgtgaagaacacccgaagaaaaac
gaaagataa
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