Prosthecochloris sp. SCSIO W1103: OO005_01580
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Entry
OO005_01580 CDS
T09697
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
proi
Prosthecochloris sp. SCSIO W1103
Pathway
proi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
proi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
OO005_01580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
proi03021
]
OO005_01580
03400 DNA repair and recombination proteins [BR:
proi03400
]
OO005_01580
Enzymes [BR:
proi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
OO005_01580
Transcription machinery [BR:
proi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
OO005_01580
DNA repair and recombination proteins [BR:
proi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
OO005_01580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
Motif
Other DBs
NCBI-ProteinID:
UZJ37920
UniProt:
A0A9E8J874
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All DBs
Position
304760..305746
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AA seq
328 aa
AA seq
DB search
MIYQMQMPEKIDVDEGTHNDRYGTFIAQPLERGYGVTLGNAMRRVLLASLPGTAITGVKI
DGVFHEFSAVDGVREDVPEIILNLKKVRFKSSNKRSCKTTLTIEGPADVTAGDIVAQEGE
FEVLNSDLHIATVNAGAKLSMDVYIGRGRGYVPAEENRGEGMPIGFIALDAIFTPIKNVK
FSVENTRVGQRTDYEKMILDVETDGSISPDDSISLAGKIINDHVSLFANFSPTEEEFTEE
EYKQQDDEFESMRKLLQTRIEDLDLSVRSHNCLRLAEIETLGDLVSRKEDELLTYKNFGK
KSLMELKEQLEKFELKFGMDITKYQMKG
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgatataccaaatgcagatgccagagaaaattgatgtcgatgaaggaacgcataatgac
aggtatggtacgtttatagcgcagcctctggagagaggatatggtgttacgctcggcaat
gcaatgcgtagagtactccttgcgtctctgcctggaaccgcaattaccggcgtcaagatc
gatggcgtttttcatgaattttcggctgtcgatggtgtccgtgaagatgttccggagatt
attctcaatcttaagaaagttcgcttcaaatcatccaataaaaggagttgtaaaacgacg
ctgaccatagagggtccggcagatgtcactgcgggtgatattgttgctcaagaaggggaa
ttcgaagtgctgaactcggatctgcatattgctacggtgaatgcgggtgcgaaactgagt
atggatgtttatatcggtcgtggcagaggatatgtgccggctgaagaaaatcgcggagaa
ggtatgccgatcgggtttatcgctctcgatgcgattttcactcctatcaaaaatgtgaag
ttttcggttgaaaatacccgtgtcgggcagcggacggattacgagaaaatgattctcgat
gtcgaaaccgacggctccatttctcctgacgattcaatcagccttgcgggtaagatcatt
aacgatcatgtttcgctttttgcgaacttttcgccgactgaggaagaatttacggaagaa
gagtacaagcagcaggatgatgagtttgaaagcatgcgcaagctgctgcaaaccagaata
gaggatcttgatctttctgttcgttcccataactgtttgaggcttgctgagattgaaact
ctcggggatctggtttcccgtaaagaggacgagcttcttacatacaagaacttcggaaag
aaatccctgatggagctgaaagagcagttggaaaagtttgaactgaaatttggtatggat
ataaccaagtatcagatgaaagggtaa
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