Prosthecochloris sp. SCSIO W1103: OO005_02650
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Entry
OO005_02650 CDS
T09697
Name
(GenBank) integration host factor subunit beta
KO
K03530
DNA-binding protein HU-beta
Organism
proi
Prosthecochloris sp. SCSIO W1103
Brite
KEGG Orthology (KO) [BR:
proi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
proi03032
]
OO005_02650
03036 Chromosome and associated proteins [BR:
proi03036
]
OO005_02650
03400 DNA repair and recombination proteins [BR:
proi03400
]
OO005_02650
DNA replication proteins [BR:
proi03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
OO005_02650
Chromosome and associated proteins [BR:
proi03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
OO005_02650
DNA repair and recombination proteins [BR:
proi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
OO005_02650
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
UZJ38122
UniProt:
A0A9E8EP03
LinkDB
All DBs
Position
complement(558346..558645)
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AA seq
99 aa
AA seq
DB search
MGNTTTKADLVNTISHRTGLTKHETESVVDCLFESIIDSLKAGKRIEIRGFGSFNIRYKN
QRLARNPRTGEKVSVDAKNVPTFKISKEFKHAVSQSLKV
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacacaacgacaaaagcagatctcgttaataccatctctcacagaaccgggctg
accaagcacgaaacagaatcggtggtcgattgtcttttcgaaagcatcatcgattcattg
aaggccggcaaaagaatagagataagaggatttggatctttcaatatccgttataaaaac
caaagactggcacgcaacccccgaacaggcgaaaaggtttcagttgacgccaagaacgtc
cccacgttcaagatatccaaagagttcaagcatgcagtgagccagagcctcaaggtttga
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