Prosthecochloris sp. SCSIO W1103: OO005_03010
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Entry
OO005_03010 CDS
T09697
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
proi
Prosthecochloris sp. SCSIO W1103
Pathway
proi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
proi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
OO005_03010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
proi03400
]
OO005_03010
Enzymes [BR:
proi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
OO005_03010
DNA repair and recombination proteins [BR:
proi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
OO005_03010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
HHH_5
Viral_helicase1
AAA_11
PIF1
Helicase_RecD
NTPase_1
nSTAND3
NPHP3_N
AAA_16
MeaB
RsgA_GTPase
AAA_22
HHH_2
HHH
ATP_bind_1
AAA_28
T2SSE
MMR_HSR1
TrwB_AAD_bind
SLFN-g3_helicase
CbiA
ABC_tran
cobW
MobB
NACHT
UvrD-helicase
AAA
KOW6_SPT5
AAA_29
AAA_5
ATPase_2
AAA_12
Motif
Other DBs
NCBI-ProteinID:
UZJ38188
UniProt:
A0A9E8EKV5
LinkDB
All DBs
Position
637254..639440
Genome browser
AA seq
728 aa
AA seq
DB search
MQESLSADPKIERLSGTVERIVFHSEDSGFSVLRVRVKGSREPVTVTGYVAAVSSGEFVE
CVGEWNNDRTYGMQFKARELAVVAPATTEGIEKYLASGMVKGVGQHFAKVLVDAFGEKVF
SVIENDPEKLCTLPGIGAKRKEMIVEAWQEQKAVRDIMVFLQSHGVGTARAVRIYKTYGD
KAITTVTGNPYRLVLDIQGIGFKTADTIASKLGTPPDSPLRARAGIRHVLQEISGEGHCA
MTKERLIEKSVELLGVSGQVVEEAVKEEIVGGGLVRDEINGVPCIYLAPLYRAENSVAVS
VRRLSMGELPWGSIDAVQALDEVEKLTGLALSASQEEALKLVLCSKFLVITGGPGVGKTT
LVNTILQIIRAKGLNVALCAPTGRAAKRLTESTGFEAKTIHRLLEFDPHSFDFKRGRDNP
LNADLIVVDESSMIDVLLMGKFLAAVPERAAVILVGDADQLPSVGPGAVLGDVISSGAVP
VVRLTEIFRQASESGIIINAHRINRGEMPLNHHGDALTDFYFVPAGEQEDIHAKLLEVVL
KRIPLRFGFDPVRDIQVLTPMNRGGLGTNALNAALQKELNPNSGSGVVRFGTDYSESDKV
IQLVNNYDKEVFNGDIGVIRAVDKEENIVVVDFDKRQVEYEFGELDELALAYATTIHKSQ
GSEYSAVVIPLAMQHYMLLQRNLLYTAVTRGKKLVMIIGQPRALAAAVSNSEAKGRLTNL
AEKIRKER
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaatccttgtcggctgatcctaaaatcgagcgcctttcgggtaccgtagagcga
atcgtttttcacagtgaagattcaggattcagcgttttgcgagtccgggtaaaaggcagc
cgtgaaccggtcacggttacggggtatgttgctgctgtttcttcaggcgagttcgtggaa
tgtgtcggtgaatggaacaatgacaggacttacgggatgcagttcaaggctcgtgaactg
gcggtggttgctccggcaacaacggaaggaattgaaaaataccttgcttcgggaatggtg
aaaggggtaggacagcatttcgcaaaggtgcttgtcgatgcgtttggggaaaaggttttt
tcggttatcgaaaacgatccggagaaattgtgcactctgccgggaatcggggcaaaacgc
aaggagatgattgtcgaggcgtggcaggaacaaaaagcagtcagagacatcatggttttt
ctgcagtctcacggggttggaacggcaagagcggtgagaatctacaaaacatacggtgac
aaggcaatcacgaccgttaccgggaatccctatcgcctggtactcgacattcaggggatc
ggtttcaaaactgcagacaccatcgcatcgaagttgggaacacctcccgactcgccttta
cgagcacgcgccggtattcgtcatgtgttacaggaaatatcgggtgaaggtcattgtgcg
atgacaaaagagcggctcatcgagaagtcggttgagcttctgggtgtttccggtcaggtt
gttgaagaggctgtaaaggaagaaatagtgggcggtggacttgtccgggatgagataaac
ggtgttccgtgtatttacctcgccccactctacagggcggaaaacagtgttgccgtatcg
gttcgaaggttgagcatgggcgagctgccctggggcagtatcgatgccgtgcaggctctt
gatgaggtggaaaaactgaccggtttggcgctttcagcatcgcaggaagaagcgctgaag
ctcgtgctttgcagcaagtttcttgtgattaccggtggtcccggcgtcggaaagacgaca
ttggtgaacacgattctgcagatcattcgtgcaaaaggattgaacgttgcgttatgcgct
ccgaccgggagggcagcgaaacggcttactgaatcgacaggtttcgaagcgaaaaccatc
catcgtctcctcgagttcgacccgcactcttttgatttcaagcgtggcagggacaatcct
ctgaatgccgatcttatcgttgttgacgaatcttctatgatcgatgtgttgctcatgggg
aaattccttgccgccgtaccggaacgtgctgccgtaattctggtgggtgacgcggatcag
ctgccttcagtcggtccaggggcggttcttggcgatgtcatctcttccggagctgttcct
gtcgtgcggttgaccgagattttccgtcaggcttccgagtcggggattatcatcaatgct
cacagaatcaatcggggagaaatgccgctcaaccatcatggtgacgcgcttaccgatttc
tattttgtccctgcaggagagcaggaagatattcacgcgaagttgctggaagtggtattg
aaacgtattcctctcaggttcggattcgatcctgtcagggatatccaggtattgacgccg
atgaaccgcgggggactcggtacgaacgctctcaatgcagcattgcaaaaagagctgaac
cccaacagtgggagtggcgttgtacgtttcgggaccgattactctgaaagtgacaaggtt
attcaactcgtcaataactatgataaagaggtattcaacggggatatcggagttatccgt
gcagttgataaagaggaaaacatcgtcgttgtcgatttcgataaacggcaggtcgagtat
gagttcggggaacttgacgaactggcgctggcttatgcaaccaccattcataaaagccag
gggtcggagtatagtgcggtggttattcctctggcgatgcagcattatatgcttcttcag
cgtaaccttctttacacggcggtcacgcgcggcaagaagcttgtcatgatcatcggacaa
cccagggcgctcgcggctgcagtaagcaacagtgaagcgaagggaaggcttaccaacctt
gcagaaaagatccgtaaagaacgttag
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