Prosthecochloris sp. SCSIO W1103: OO005_03460
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Entry
OO005_03460 CDS
T09697
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
proi
Prosthecochloris sp. SCSIO W1103
Pathway
proi03410
Base excision repair
proi03430
Mismatch repair
proi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
proi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
OO005_03460 (recJ)
03430 Mismatch repair
OO005_03460 (recJ)
03440 Homologous recombination
OO005_03460 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
proi03400
]
OO005_03460 (recJ)
DNA repair and recombination proteins [BR:
proi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
OO005_03460 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
OO005_03460 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
OO005_03460 (recJ)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
UZJ38868
UniProt:
A0A9E8J8C2
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Position
731084..732790
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AA seq
568 aa
AA seq
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MKRYRWNILVSDEEKSAKLSRDINVSMPIARALCNRGIFCFEDAKKFFRPSLDLLPSPFL
FKDMQKAVDRVRKAVETGEKILVYGDYDVDGTTGTALLYLFLHSLGAEVSFYINDRFSEG
YGLSKAGVAHAVKLETSLVVTVDCGMGASHEIELLSAEGIEVIVCDHHEPEKLPPAYVIL
NPKVPGCSYPFRELCGCGVALKLIHAFTESMNQPSEKWQQYIDLVAIATAADMVPLEKEN
RIYMHKGMELLKKRPRAGIQEMLSLMGIEAGLLGTGHIAFGIAPRINAAGRMHTARTAVE
WLIAGSKDEARVHAAELDRLNKERRQIDSCMLKSAEAMVEGHFASFCSSIVLYHEEWHLG
VLGIVASRLQDKYYLPTVVMGGGDGVVKGSVRSVRGLNIFEVLQQCDTFLEKFGGHDAAA
GITLKPENIPGFRKRFDRICSEKLSLEERQKELQVDSRLLLEDVSGKFLNVLKQFGPFGQ
GNREPLFCSSNLRLSGLPRLLQGKHVKFAVKDTSGRIHDVIAFGREDIYRELERGSRRMF
SMIYSLEENEWNGRKNVQLKLKDMGFDE
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgatatcgatggaatattctcgtgtccgacgaggaaaagtcggcaaaactttcg
cgtgacattaatgtcagtatgccaatcgcaagggcattgtgcaaccgcgggattttttgt
tttgaagatgcgaaaaagtttttcagaccgagtctcgatttgttgccgtcgccgtttctt
ttcaaggatatgcagaaggctgtcgaccgggtccgcaaagctgtggaaaccggagaaaag
attctcgtatacggtgactatgatgtggatggaaccaccgggacagcgcttctttacctc
tttttgcactctttgggagctgaggtgtcgttctatatcaacgacaggttttctgaagga
tacggtttgtccaaagccggagtggctcatgcagtgaagcttgaaacatcgctggtcgtt
acggttgactgtggcatgggggcttcccatgaaatagaactgctctcggcggaaggcata
gaggtgattgtctgtgatcatcatgagcccgaaaaactgcctccggcgtatgtgattctc
aatcccaaagtacctggctgcagttatccgtttcgtgagctctgcggctgcggagtagcc
ctgaagcttatccatgctttcaccgagtccatgaaccaaccatctgaaaaatggcagcag
tatatcgatctcgttgctattgcaactgcagcagatatggtacctcttgaaaaagagaac
agaatatacatgcacaagggaatggagcttttgaaaaaaaggccccgtgccgggattcag
gaaatgctttccctgatgggaatagaagccggtctgcttgggacaggacatatcgctttc
ggaattgcaccgagaatcaacgctgccggccgcatgcatacagcaagaactgccgttgag
tggcttattgccggttccaaggatgaagcgagggttcatgcagcagagcttgaccgtttg
aataaagagcggcggcagatcgatagttgtatgctgaaaagcgcagaagcgatggttgag
ggtcactttgccagtttctgttcgtcgatcgtactgtatcatgaagagtggcatctcggt
gttctcgggattgtggcgtcccggttacaggataaatactatctgccgacagttgtcatg
ggtggaggtgacggggtggttaaagggtcggtgcgaagtgttcgagggcttaatattttc
gaggttctgcaacagtgtgacacttttcttgaaaagttcggggggcatgacgctgcggca
ggtattacgctcaaaccggaaaacattcccggtttccgtaagcggttcgacagaatatgt
tctgaaaaactttcactcgaagagcggcagaaagaacttcaggtcgattcccgcttattg
ctcgaggatgtttccggtaaatttctcaatgtcttgaaacagttcggccctttcgggcag
ggtaatcgggaacctctgttttgcagttcgaatctcaggctttccgggttgccgagattg
ctgcagggtaaacatgtgaagtttgccgtgaaagatacatccggacggattcatgatgtt
attgcattcggcagggaagacatttatcgtgaactcgagcgaggctcacgcaggatgttc
tctatgatttattcgcttgaagaaaacgagtggaacggtcgaaaaaacgttcagctcaag
ctcaaggatatgggatttgatgaatga
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