Prosthecochloris sp. SCSIO W1103: OO005_05485
Help
Entry
OO005_05485 CDS
T09697
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
proi
Prosthecochloris sp. SCSIO W1103
Pathway
proi03030
DNA replication
proi03430
Mismatch repair
proi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
proi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OO005_05485
03430 Mismatch repair
OO005_05485
03440 Homologous recombination
OO005_05485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
proi03032
]
OO005_05485
03400 DNA repair and recombination proteins [BR:
proi03400
]
OO005_05485
Enzymes [BR:
proi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OO005_05485
DNA replication proteins [BR:
proi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OO005_05485
DNA repair and recombination proteins [BR:
proi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OO005_05485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
RNase_H_2
Rv2179c-like
DUF6601
Motif
Other DBs
NCBI-ProteinID:
UZJ38647
LinkDB
All DBs
Position
1179187..1179885
Genome browser
AA seq
232 aa
AA seq
DB search
MINFLAKRIALRRCRCGELPAIICGYVNSFAGSSSFDLPLEKARFVVFDTETTGFDSATD
LVISIGAIALNGVQINVEDSFEVLIRRDSVGDCEAVTTHGLLLRDLHEGSDENEAINGFL
EYARDSVLVAQHADFDVAMINRILKHRYRFELFNQVIDTASLAKRLEKGPYYNLAHKGGE
YRLDVLLERYNIRLYDRHTAAGDAFLTAQLFQMLLMKARRAGIKTLRELLLK
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
gtgattaactttcttgcaaaaagaattgcattgcgccgttgccggtgtggtgaacttcct
gcaatcatttgcggctatgttaacagctttgcaggatcttcaagttttgatctgcccctg
gaaaaggctcgatttgttgttttcgataccgaaacaaccggattcgatagtgcaacggac
ctggttatctcaatcggagcgattgctctcaacggtgtccagatcaacgtagaggattca
tttgaagtgcttatccgtagagacagtgtgggtgactgtgaggcagtgaccactcatgga
cttcttttgcgggatctccatgagggcagtgatgaaaatgaagcgataaacggctttctt
gaatatgcaagagacagtgttcttgttgcccaacatgccgatttcgatgttgccatgata
aaccgcatattgaagcatcgataccgattcgagttgttcaatcaggttatcgacacggca
agtcttgccaaaaggcttgagaaaggaccatactacaatcttgcacacaaaggaggggag
tacaggctggatgttctgctggaacgctataatatccgcctctatgacaggcatactgca
gcaggtgatgcttttcttactgcacagctttttcagatgctgcttatgaaagccaggcgt
gccgggatcaaaacgctgcgggaactgcttttgaagtaa
DBGET
integrated database retrieval system
