Prosthecochloris sp. SCSIO W1103: OO005_06275
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Entry
OO005_06275 CDS
T09697
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
proi
Prosthecochloris sp. SCSIO W1103
Brite
KEGG Orthology (KO) [BR:
proi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
proi03400
]
OO005_06275 (radA)
DNA repair and recombination proteins [BR:
proi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
OO005_06275 (radA)
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Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DUF7125
DnaB_C
ChlI
Lon_C
AAA_14
AAA
AAA_22
AAA_16
ABC_tran
nSTAND3
AAA_5
Rad51
AAA_24
PAXNEB
NTPase_1
TackOD1
SLFN-g3_helicase
NACHT
RNA_helicase
AAA_28
Motif
Other DBs
NCBI-ProteinID:
UZJ38803
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Position
1352940..1354307
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AA seq
455 aa
AA seq
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MAKSAIRYICTSCGAVSLKYSGKCFACQSWGTLEESAIEEPLAGKTSTDNVLPASETLQH
PGNSVSQQRISTGIGELDRVLGGGLMPASAILIGGEPGIGKSTLMLQLARHTSPLNILYV
SGEESPSQIRDRAKRLSIISNDLKLVPEVNLEKIIGVIERDQPDIVIIDSIQTLYSGEYK
SSAGTITQIRECTSELIRSAKSRNFILLVIGHITKTGSLAGPKTLEHMVDTVLQFEGEGY
QWYRMIRSVKNRFGPTNEIGVFRMDEKGLEEVKNPSEFFISGRSTGVPGNSVLAAIEGSR
AVLVEVQALVSKTNYPMPQRISSGVDLKRITIILAVLEKRLGIPTWGQDVFIKVAGGLKL
VEPASDLAVAAAVASGVSNTALSPGMVCAGEIGLSGELRAISDGERRIREAAHLGFDTII
LPEANTRELKTSIRKLPVTVTGCNSLQEALNHMHL
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaatcagcaatccgctatatctgcaccagttgcggtgcagtctcgcttaaatat
tccggtaaatgttttgcctgccagagctggggaacccttgaagaatcggccatcgaagaa
ccattggcgggcaaaacctccaccgacaatgttctacccgcttcggaaacgttgcagcac
cctggaaattctgtgtctcagcaaagaatttcaacaggaatcggagaacttgaccgggta
ctcggtggaggcctgatgccggcttcagcaatccttatcggcggcgaaccgggcattggc
aaatcaaccctgatgctccagctcgcccgacatacttcacccctgaatattctctatgtt
tcgggagaagaatcaccgtcacaaatcagggaccgtgccaaaagactttccatcatatcc
aatgatctgaagcttgttccggaagtcaatcttgaaaaaataatcggggtcatcgaacgt
gatcagcctgatatcgtcatcatcgactcgatacaaacgctctattccggagaatacaaa
agttcggccggaacaataacgcagatacgagaatgcacctcggagctcatccgctcagcc
aaaagccgcaacttcatcctgctcgtcatcggccacatcaccaaaaccggttcacttgcc
ggtccgaaaacactcgaacatatggtcgatacggttctccagttcgaaggtgaaggctat
cagtggtaccgaatgatccgttcggtcaaaaaccggttcggaccaacaaacgagatcggt
gtattccggatggatgaaaaagggctcgaagaagtaaaaaatccttcggaattctttata
tccggccgctccaccggcgtaccgggaaactcggtgcttgccgccattgaaggatcgagg
gccgtgctggtagaggtgcaggcattggtcagtaaaacaaactacccgatgccacagcga
ataagttcgggggtcgatctgaaacgaataacaatcattctcgccgttctcgaaaaaagg
cttggtatacctacctggggacaggatgttttcatcaaggtagcgggaggattgaaactg
gttgaacccgcatcggatctggcggtggcagctgcggtcgcttccggagtcagcaatacc
gctctatctcccggtatggtatgtgcgggggaaatcggactttcgggtgaactcagagcg
ataagcgacggagaacgccgaatacgcgaggccgcccacctcggattcgacacgattata
ttgccggaagcgaacaccagagaactgaaaacctccatccgcaaacttcccgttacggta
acaggctgcaactccctacaagaagccctgaatcacatgcacctctaa
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