Prosthecochloris sp. SCSIO W1103: OO005_07140
Help
Entry
OO005_07140 CDS
T09697
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
proi
Prosthecochloris sp. SCSIO W1103
Brite
KEGG Orthology (KO) [BR:
proi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
proi01011
]
OO005_07140
Enzymes [BR:
proi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
OO005_07140
Peptidoglycan biosynthesis and degradation proteins [BR:
proi01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
OO005_07140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
HTH_28
Motif
Other DBs
NCBI-ProteinID:
UZJ36541
UniProt:
A0A9E8J344
LinkDB
All DBs
Position
complement(1541092..1542924)
Genome browser
AA seq
610 aa
AA seq
DB search
MSGIVANLLNDTVFVRVAHFYIFPAVLLLLQTVVFSDSFAGKKGNVADDSAVAEMLDSYV
TTTYFSDRKFKKWKDGGIDGYHATFIPQFDDETYSERIARLNRQTPLRLAYNSHVKGFIK
LYSVDKRKLTAKVLGLADMYFPLFEKKLRQYNIPLELKYLAIVESALNPTAVSRANAKGL
WQFIYGTGKMYGLESSAFVEDRFDPEKATIAACRHMRDLYNIYGDWFLVLAAYNSGAGNV
NKAIRRSGGARDYWSIWPHLPSETRGYVPAFIAVTYIMNYYREHNISSLEPVYSYDDIGA
VRVSEIVAFDQVSEVIGVSVEDLQLLNPQFKLNLVPAGAGNPYYLKLPKEYLGKFNRKEK
KIYAHKTRQGLDGAALLAKAREVKAVSPKAVSPKKQKKNIHVVRRGQTLASIARTYRCYV
SELIRWNNLKSSKIYPGQKLKVFGTPGTGSPAKSSVVYHKVKRGESLGLIAGKYGVSVSK
LASWNNLGRKRTIYPGQRLKIYGVSTRTSSKKPSYHKVKRGESLGLIAGKYGVSVSKLAS
WNNLGRKRTIYPGQKLKLSAPTKIHKVRRGESLGLIARKYGVSVSQLVSWNKLGGKRTIY
PGQRLTIKIN
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaggaattgttgcaaaccttcttaacgatacggtgttcgtgagagtcgctcatttc
tatatttttccggctgtcctgctgcttttgcaaacggttgttttttccgacagttttgcg
ggcaagaaaggtaatgttgctgatgactcggcggtggctgaaatgctggacagctatgtg
acgacaacatatttcagcgacaggaaattcaaaaagtggaaagacggtggtattgacggg
tatcatgctacatttattccgcagtttgacgatgaaacctattcggaaagaattgcccgg
ttgaatcgtcaaacaccactcaggcttgcttataacagccatgtcaaaggctttatcaag
ctgtattcagttgataagcgcaagctgaccgcaaaggttctcggtttggccgatatgtat
tttcctcttttcgaaaaaaagctccggcagtacaatatccctctcgagctgaagtatctg
gcaatcgtagagtcggcactcaacccgactgcggtttcacgggcaaatgcgaaagggctc
tggcaattcatttatggaaccggaaagatgtatggtctcgagtcgtcagcctttgtcgag
gaccgtttcgatccggagaaagcaaccatcgccgcatgcaggcacatgcgagatctttat
aatatatatggggactggtttcttgtgcttgccgcctacaactccggagccggaaatgtg
aacaaggcgattcggcgatcgggcggtgccagggattactggtccatctggccgcatctt
ccttcggaaaccaggggatatgtgcctgcttttattgcagttacctatatcatgaactat
taccgtgagcacaatatcagttctcttgaaccagtgtactcgtatgacgatatcggggcg
gttcgtgtatcggagattgttgctttcgatcaggtaagcgaggttatcggtgtttctgtc
gaggatcttcagcttctcaatcctcagttcaagttgaatcttgttccagcaggtgccggt
aatccttactatttgaaacttcctaaagagtatcttggcaagtttaaccggaaagaaaag
aaaatctacgcgcacaagacccgtcagggacttgacggagcggctttgctggcaaaagct
cgagaagtgaaggcggtttctcccaaagctgtttctcccaaaaagcagaaaaaaaacata
catgtcgtaaggcgcggtcagacactggcctcgatagccagaacctaccgctgctatgtc
agtgagcttatacggtggaataacctgaaaagttcgaagatttatccgggacagaagctc
aaggtgttcggaacaccgggaaccgggagtccagcaaaatcttccgtcgtgtatcacaag
gtgaagcgcggtgaaagtcttggtcttatagccggaaagtacggcgtcagtgtgagtaag
ctcgcttcctggaacaatcttgggcggaaacgcacgatatatcccggtcagaggctcaag
atttatggcgtttccacccggacatcatcgaaaaaaccaagttatcacaaggtgaaacgc
ggtgaaagtcttggtcttatagccggaaagtacggtgtcagtgtgagcaagctcgcttcc
tggaacaatcttggacggaagcgcacgatatatcccggtcagaaacttaaactttctgct
ccgacaaaaattcacaaagtcaggaggggagaaagccttggccttatagccaggaaatat
ggggtgagtgtcagtcaacttgtctcttggaacaaattaggcggaaaacgtacgatatat
cctggacaacggcttacaatcaagataaattga
DBGET
integrated database retrieval system
