Prosthecochloris sp. SCSIO W1103: OO005_09830
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Entry
OO005_09830 CDS
T09697
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
proi
Prosthecochloris sp. SCSIO W1103
Pathway
proi03030
DNA replication
proi03430
Mismatch repair
proi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
proi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OO005_09830 (holB)
03430 Mismatch repair
OO005_09830 (holB)
03440 Homologous recombination
OO005_09830 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
proi03032
]
OO005_09830 (holB)
03400 DNA repair and recombination proteins [BR:
proi03400
]
OO005_09830 (holB)
Enzymes [BR:
proi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OO005_09830 (holB)
DNA replication proteins [BR:
proi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OO005_09830 (holB)
DNA repair and recombination proteins [BR:
proi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OO005_09830 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DUF6587
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
UZJ38906
LinkDB
All DBs
Position
2138755..2139927
Genome browser
AA seq
390 aa
AA seq
DB search
MSWQDIIGQNLQVSILQKAVLSDRLAHAYLFTGPEGTGKESVAFELTKVLNCENPDADNQ
TGSCGTCRSCREIDNFMHPDIEYVFPVESALLEKNDPAKAENKRTTEARERYESLIEKKK
QNPFFTPSMDRSMGILTEQITSLQQKASFMPAENGKKVFVLSQPEKLHPSAANKLLKLLE
EPPGHILFILVSSRPESVLPTIRSRCQILKFSRIKPSDIENWLQNTHPEFQTEVQRFIVN
FSRGNLGIATEMIDSFKEGRHETFEGIATRDRAIDYLRKLLSPGKLAEAITDTENISKSF
GKQEMVTFLGSLLLFFQDIHHKIINPAWDSFNNPDLGTTIDRFAKNFPNPDFFAISTITE
EAIRAIKRNVNPLLTLSVYSIRLKNLVGRS
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgagctggcaggacattatcggtcaaaatctgcaggtaagcattttgcaaaaagccgtc
ttatccgataggctcgcccatgcttacctttttaccgggcctgaaggaaccggcaaagaa
tctgtcgccttcgagctcaccaaggtgctcaattgcgaaaaccctgatgccgacaatcaa
accggttcatgcggaacttgccgaagctgcagggaaattgacaatttcatgcaccccgac
atagaatatgtctttcccgttgaatcggctcttcttgaaaaaaacgatcctgcaaaagct
gaaaacaaacgcacaaccgaagcaagagagcgttacgagtcattgatcgagaagaaaaaa
cagaaccccttcttcaccccatcgatggaccggtcgatgggaatccttaccgaacagata
acctcccttcagcagaaagcatcgttcatgccggctgaaaacgggaaaaaagtattcgtt
ctatcgcagcctgaaaaacttcacccctctgcagcaaacaaactgctgaagttgcttgaa
gaacctccaggacatatacttttcatattggtatcctcgcgccccgaaagcgtcctaccc
accattcgttcacgctgccagatattgaaattctcgagaataaaaccctcggacattgaa
aactggttgcaaaacacgcatcccgagttccagactgaagtgcagcgtttcatcgttaat
ttttcaagagggaacctcggcattgcaacagagatgatcgacagcttcaaagaaggaagg
cacgagacgttcgaaggtattgcaacccgtgaccgggcaattgattatttgcgcaaactt
ctctccccgggcaaactggccgaagcgattacagatacggagaacatttcgaaaagcttc
ggaaaacaggaaatggtaacatttctcggctctcttctgcttttttttcaggatattcat
cacaaaatcatcaatcctgcatgggactcattcaacaaccctgatctcggcacaacgata
gaccggtttgcaaagaatttccccaaccccgacttttttgccatttcaacgataaccgaa
gaagccatccgcgcaatcaaacgcaacgtcaacccgctgctaaccctttcagtctactca
atccggctcaagaacctggtcgggcgctcctga
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