Prosthecochloris sp. SCSIO W1103: OO005_10120
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Entry
OO005_10120 CDS
T09697
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
proi
Prosthecochloris sp. SCSIO W1103
Pathway
proi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
proi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OO005_10120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
proi03019
]
OO005_10120
03016 Transfer RNA biogenesis [BR:
proi03016
]
OO005_10120
Enzymes [BR:
proi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
OO005_10120
Messenger RNA biogenesis [BR:
proi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
OO005_10120
Transfer RNA biogenesis [BR:
proi03016
]
Prokaryotic type
tRNA degradation factors
OO005_10120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
KH_1
S1
PNPase
KH-I_KHDC4-BBP
KH_2
OB_RRP5_4th
KH_KhpA-B
aRib
CTD9
Motif
Other DBs
NCBI-ProteinID:
UZJ37099
UniProt:
A0A9E8J4E3
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All DBs
Position
2194738..2196933
Genome browser
AA seq
731 aa
AA seq
DB search
MFIRKAIDLEGGKTITIETGKMAKQADGAVVASMGDTMVLATVVSSKTPPPPNQDFFPLQ
VEYREKYSAAGKFPGGFIKREGRPSEKEILSARLIDRALRPLFPDGYYQDTQIIISVISS
DQLNDADVLGGIAASAAIMVSDIPFSNSMSEVRVGRINGEFIINPNINELSRSDIDISIG
GTAGTICMLEGEMDEISEAEMLDAIRFGHEAIKKICSLQDEIAAEVAKPKRSFLPIAAPE
DLQESIAELCAVSLKELAYMPLAKEERAEKTSEIYKSVTQKILARYKEEISADDIAADPA
KALYLNEQIISGHIHDIEKKVMRHMILDDAKRLDGRTLEEVRPISIELGLIPRAHGSALF
TRGETQALVTLTLGTKKDAQMIDTLIDDTEKRFMLHYNFPPFSVGETGRVGGVGRREIGH
GNLAERAVKKVAPSDAEFPYTIRIVSDILESNGSSSMASVCGGTLAAMDGGVPLTKPVSG
IAMGLIKEGERYAVLSDILGNEDHLGDMDFKVAGTRDGITACQMDIKIDGLDYHILEQAL
EQSKKGRLHILEKMTDAISDPREEIGRYAPRLSTIQVPVDAIGMIIGKGGETIRSITEET
GAEINVEDDGTVTIAAPSGEGASAAIETIKTLISKPEVGLVYSGKVRDIREELGAFVEFL
PKTDGLVHISEIAKERVSKVSDYLKPGDRIKVKLIDIRKDPRTGKTRYALSMKALLDVPP
ESENGSPAQGE
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgtttatacgcaaagcaatcgatctggaaggcggaaaaactatcaccattgaaaccggc
aaaatggcgaaacaggccgatggggccgttgtcgcaagtatgggcgacaccatggttctt
gcaaccgtggtttccagtaaaactcctcccccaccgaatcaggatttctttcctcttcag
gtcgagtatcgtgaaaaatattccgcagccggaaagttcccgggggggttcataaaacgt
gaaggcaggccttctgaaaaagagatcctctccgcccgcctcatcgaccgcgctcttcgc
ccgcttttcccagacggttattatcaagacacacaaatcatcatctcggttatctcctcc
gaccagcttaacgatgccgatgtacttggaggcattgccgcctctgctgccatcatggtt
tccgatattccgttttcaaactccatgtcggaagttcgtgtcggcaggatcaacggtgag
tttatcatcaacccgaatatcaacgaactgtcaagaagcgacatcgatatcagcattggg
ggtacagccggtacaatctgtatgcttgaaggcgaaatggacgagatatccgaagctgaa
atgctcgacgcaatccgttttggacatgaagccatcaaaaaaatctgttccttgcaggac
gaaatcgccgcagaagtagcaaagccaaaacgatcgttcctcccgattgcagccccggag
gacttacaggaaagcatcgcagaactgtgtgcggtttccctgaaagaacttgcttatatg
cctctcgctaaagaggaacgcgcagaaaaaacttcggagatatacaagtccgtaacgcaa
aaaatcctcgcccgttacaaggaagaaatctctgccgatgatatcgccgccgatcctgca
aaggctctttatctcaatgaacagattatttcgggtcatattcatgatatcgagaaaaaa
gtgatgcgccacatgattctcgatgacgccaagcgtcttgacggcagaacactcgaagag
gtcagacccatcagtatcgaactcggtcttatccccagggctcatggttcggcgctcttc
accagaggcgaaacccaggcgctcgtcacgctgacgctgggcacgaaaaaagacgctcag
atgatcgacacccttatcgacgataccgaaaagcggttcatgctgcactataattttcct
cccttctcagttggtgaaaccggacgtgtaggaggcgtaggacgccgtgagatcggccat
ggaaaccttgcagaaagagctgtcaaaaaagtggcaccttccgatgcagaattcccttac
accattcgtatcgtatccgacattctcgaatcgaacggctcttcatccatggcgtccgta
tgcggaggaactcttgctgcaatggatggcggcgtgcctctcacgaaaccggtatcgggt
attgccatggggcttatcaaagaaggtgaacgatacgcggttctctccgatattctcggt
aacgaagatcatcttggagatatggacttcaaggtggccggaaccagagacggtatcacg
gcatgccagatggatatcaagatcgacggtcttgattatcatattcttgaacaagccctc
gagcagtctaaaaaaggacgcttgcatatcctcgaaaagatgaccgatgcaatttccgac
ccgagagaggaaatcggcagatatgcaccgcgcctttcgactatccaggtaccggtagat
gcgatcggcatgatcatcggcaagggtggcgaaacgatcagaagcataacggaagaaaca
ggcgcggaaatcaatgtggaagacgacggtacggttaccattgccgcaccgagcggagaa
ggtgcatctgcggcgatagaaacgatcaaaacgctgatctcgaaaccggaagtcggcctg
gtttattccggcaaggtccgcgacatacgagaagaactgggcgcgtttgtcgaattcctc
ccgaaaaccgatggacttgtccacatctctgaaattgcaaaagaaagagtctcgaaagtg
agtgactatctgaaacccggagaccgtataaaagtcaagctgatcgacatccgtaaggat
cccagaacaggcaagacacgttatgcactatccatgaaagcactgcttgacgttccacca
gaatccgaaaacgggtcaccggcacagggagagtaa
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