Prosthecochloris sp. SCSIO W1103: OO005_10205
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Entry
OO005_10205 CDS
T09697
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
proi
Prosthecochloris sp. SCSIO W1103
Pathway
proi03030
DNA replication
proi03410
Base excision repair
proi03420
Nucleotide excision repair
proi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
proi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OO005_10205 (polA)
03410 Base excision repair
OO005_10205 (polA)
03420 Nucleotide excision repair
OO005_10205 (polA)
03440 Homologous recombination
OO005_10205 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
proi03032
]
OO005_10205 (polA)
03400 DNA repair and recombination proteins [BR:
proi03400
]
OO005_10205 (polA)
Enzymes [BR:
proi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OO005_10205 (polA)
DNA replication proteins [BR:
proi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
OO005_10205 (polA)
DNA repair and recombination proteins [BR:
proi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
OO005_10205 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OO005_10205 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
UZJ37115
LinkDB
All DBs
Position
2211770..2214577
Genome browser
AA seq
935 aa
AA seq
DB search
MASLNNTGQLTFDMSTASNKKQPERTGDKPSLFLLDGMALVYRSFFALQRTGMTTKEGIP
TGATYGFFVTLLKIYETYKPHYLAVAFDSAEKTFRHELYELYKANRPAPPEDLIAQLDLI
FKLVEAMRIPVLKQPGYEADDLIGSAARKFEQDCTVYIVTPDKDLAQLVHDGVKILKPGK
KQNELMLLGTGEIIEQFGVSPERFTDLLTLTGDSSDNIPGAKGIGPKTASKLLNTYGSLE
NVFNHLDELPPKSRKSLEEFETQRKLIEDLVTIRTDLPLDTTLLDLESEEPDGSKLFNLL
DELEMKSVAARIPQIFPGIQPPRHGNTDLPNPETATPENVAYHLIGDEKGVRNLEKELSA
LTGFAIDTETTSLNTLEAELVGISVSWKPQEAYFIYCTPGGLSPETVLDILKEVLENQAI
VKNGQNLKYDMLVLKNYGIRLSPVGFDTMLASYVIDPEEKHNLDDLADRYLGYRTTTYSE
LTGSGKKAIPIHEVPVDKLTAYACQDADIALRLQATQEKMLSENTELYNLCHDIEFPLVE
VLAEMEFKGISLDTGQLKRTAEIVNRQIEDLKERIYETANVSFNIDSPKQLGNILFNVLG
LPAKKTTKTGYSTDVRVLEDLSLLHPVAKDVLEYRSLQKLKTTYIEALPRMLCRKTGKLH
TSFNQHITATGRLSSSNPNLQNIPIRTALGKEIRKAFIPSEESNYLLSADYSQIELRIAA
EISQDPHLISAFKQGEDIHAATAKAIFDTETITDDMRRKAKEVNFGVLYGIQPYGLAQRL
NITQKEAKTIIETYKSKYPGLFEALQKIINDATEKGYVATLIGRRRYISDLRSKNRNIRM
AAERAAMNTPIQGTAADIIKCAMSLTAKKLHDNDMQSSMLLQVHDELVFETTPDEKKALS
TIATDCMVKAAEICGLSNVPVEVEIGTGKNWLDAH
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgttgaataataccggtcaattaacattcgatatgagcaccgcatcgaacaaa
aagcagccggaacgcaccggggacaaaccgtccctctttctgctcgatggcatggcgctg
gtctaccggtctttctttgcgctgcaacgaaccggaatgacgacaaaggaaggcattcct
acaggtgcaacatatgggtttttcgtgacattgctgaaaatctacgaaacctacaaaccg
cactaccttgccgtcgctttcgacagtgcggaaaaaacgttccggcacgaactctacgaa
ctttacaaggcgaaccgtccggcccccccagaagatctcatcgcacagctggatctgatt
ttcaagcttgtcgaagcaatgcggattccggttctcaagcaaccgggctatgaagccgat
gacctcataggaagtgcagcgagaaagttcgagcaggactgcaccgtttatatcgttaca
cctgacaaagaccttgcacagcttgttcatgacggagtaaaaattctcaaacccggcaaa
aaacaaaatgagctgatgcttctcggcaccggagaaataatagagcagttcggtgtctca
ccggaacgtttcaccgatcttctgacgctaaccggcgatagttcggacaatatcccggga
gcaaaaggaatcggtcctaaaacagcctcgaaactcctcaatacatacggcagcctcgaa
aacgttttcaaccatcttgacgagcttcccccgaaatcgcgcaaaagccttgaagaattc
gaaacccagcggaaactgatcgaggatctcgttacgatcaggacggatctccccctcgat
acgacactgcttgaccttgaaagtgaagaaccggatggctcgaaacttttcaatctgctt
gacgaactggaaatgaaaagcgtggcagcaaggattccacaaattttccccggcatccag
ccccctcgacacggtaacaccgacttgccgaaccctgagactgcaacgcctgaaaatgta
gcctatcatctcattggcgatgaaaaaggagtgcgtaaccttgaaaaagaactctcggca
ctgacaggcttcgccatcgataccgaaacaaccagtctgaatactctcgaagccgaactt
gtgggaatatcggtcagctggaaaccgcaagaagcatacttcatctattgtactccggga
ggactgagccccgaaacggtactcgacatactcaaagaagtgcttgaaaaccaggccatt
gtcaaaaatggccaaaatctcaagtacgatatgcttgtgcttaaaaactacggaatacgg
ctttctccagtcggattcgataccatgctcgcaagttatgtcatcgatccggaggaaaaa
cacaaccttgacgatcttgccgatcgatatctcggataccgtaccacaacgtacagtgag
ttgaccggctcagggaaaaaagccatacccatccatgaagttcctgtcgacaaactcacc
gcctatgcctgtcaggacgcagacatcgcacttcgactccaggcaacccaggagaaaatg
ctcagtgaaaataccgaactttacaacctgtgccacgatatagagtttccgctcgtcgaa
gtactcgcagagatggaattcaaaggaatctccctcgataccggccaattgaaacgaaca
gcagaaatcgttaaccggcagatcgaggacctcaaagaaagaatctacgaaacagccaac
gtcagcttcaacatcgattcgcccaagcagcttggtaatatcctgttcaatgttctcggc
ctcccggcaaaaaaaacaaccaaaaccggttactcaaccgatgtgagggtgctcgaggat
ctgtcgctgctccatccggttgcaaaagatgttctggagtaccgcagtcttcagaaactc
aaaaccacctacatcgaggcgcttcccagaatgctttgccgaaaaaccggaaagctgcac
acctctttcaaccagcacattaccgctaccggcagattgtcttcctcgaatcccaacttg
cagaatatcccgatccgtacagcattgggtaaagaaatccgcaaggcgttcataccctct
gaagaaagcaattatcttctttcagccgactattcgcagatagagcttcgtatcgcggca
gaaatctctcaagatccccaccttatatcggcattcaaacagggagaagatatccacgca
gcaacggcaaaagcgattttcgacacggaaaccataaccgacgacatgaggcgaaaagcc
aaagaagtcaatttcggtgtcctctacggcattcagccatacggccttgcccagaggctc
aatatcacccaaaaggaagccaaaaccatcattgaaacgtataaatcgaaatatcccggg
ctgtttgaagcactccagaaaatcatcaacgatgcaactgaaaaagggtacgttgcaacg
ttgatcggacgcagaagatatatctctgacctgcgcagcaaaaacaggaacattcggatg
gcagctgaaagggcagccatgaacactcctattcagggaaccgcagccgacatcattaaa
tgtgcaatgagcctcacggcaaaaaagctgcacgacaacgacatgcagtcctcgatgctc
ctgcaggttcacgatgaacttgtttttgaaacaacaccggatgagaaaaaggctctctcg
acaatagcgacggattgcatggtaaaagcagccgaaatatgcggcctatcgaacgtaccc
gtcgaggttgaaatcggaaccgggaaaaactggctggacgcacactga
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