Prosthecochloris sp. SCSIO W1103: OO005_12580
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Entry
OO005_12580 CDS
T09697
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
proi
Prosthecochloris sp. SCSIO W1103
Brite
KEGG Orthology (KO) [BR:
proi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
proi03032
]
OO005_12580 (topA)
03400 DNA repair and recombination proteins [BR:
proi03400
]
OO005_12580 (topA)
Enzymes [BR:
proi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
OO005_12580 (topA)
DNA replication proteins [BR:
proi03032
]
Prokaryotic type
DNA Topoisomerases
OO005_12580 (topA)
DNA repair and recombination proteins [BR:
proi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
OO005_12580 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
DUF2752
Motif
Other DBs
NCBI-ProteinID:
UZJ37564
UniProt:
A0A9E8J4V4
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Position
2720735..2723140
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AA seq
801 aa
AA seq
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MASSSATSSAKDKTLIVVESPSKAKTINKYLGKDYMVFASVGHIKDLPKKEIGLDFDNHY
EPRYEVIAGKEKVVRQLKKLAGEASDILIATDPDREGEAIAWHIANEVDFTRKPVHRVLF
NEITKKAIVEAIQHPHQIDYRLVRSQQTRQGLDKIVGYKISPFLWNVVLRGLSAGRVQSV
ALRLICERENEIEKFQPKEYWTIIADFTTATGETFSAKLVKINGNKAEINNGEEAEKTAS
AILSRICGVAAITPKLQQRKPPLPFTTSLLQQAASNQLGFGSKKTMRIAQQLYEGIEIGA
EGATGLITYMRTDSTRISSEAVEQAERYITQQYGTEYTGGTKAAKNSKKTQDAHEAIRPT
LVSHTPDAMKQFLSPDQFKLYALIWKRFLASRMAPAKIEQTRVEVSDHEQQFLFRASGSK
VLFPGFLKVYNEQKELDYEARKSTRDDEEKEQIVQLPKKLSVNETLNLDDLEKKQSFTRP
PARYTEASLVKELDNYGIGRPSTYAGIFSTLQDRRYVELQKKKIIPTELGRDVSVILVAN
FPDIFNVKFTAHMENELDKVATGEDDYEEVLDSFYRPLETALSVRKNDPLLPQNHDAETC
DKCGKGKMVIKWTASGKFLGCSNYPSCRNIKPIASAKVRPTETGIRCPGCSNGRMVLRNG
RFGPFLACTNYPKCNTILKLDKQRKIEPPKTPPLETDLDCPKCGAPLYLRTGKRGLWLGC
SKFPKCRGRQAWGQLDPSIQQHWQEAMEEHQAKHPLVTLRMVDGSPVDMRMSIDDIIARA
EENGLVEIDNGEEQEKPAEER
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttcttcagcaacctcgtcagcaaaagacaaaacacttattgttgtcgaatcc
ccgtcaaaggccaaaaccatcaacaaatatcttggaaaagattacatggtatttgcatcg
gtcggccatatcaaggatctgcctaaaaaggagatcggtctggatttcgacaaccactac
gagcctcgctatgaagttatcgccggtaaagaaaaagtagtcaggcagctgaaaaagctt
gccggagaagccagcgacattctcatcgctacagaccccgaccgtgagggggaagctatt
gcctggcatatcgcaaacgaggttgactttacccgtaaacccgttcaccgtgtcctgttc
aacgagataaccaaaaaggccattgtcgaggcaattcagcatcctcatcaaatagattac
cgcctggtccgttcacagcaaacccgtcagggtcttgacaaaatcgtcggttacaaaata
agcccgtttctctggaatgtagtgctgcgaggattgtcagccggaagagtacagtccgtc
gccctcagactgatttgtgaacgcgaaaacgagattgaaaaatttcagccgaaagagtac
tggaccatcattgccgatttcacgacggcgacaggggaaacattctcggcaaagctggtt
aaaataaacgggaacaaggccgaaatcaacaatggggaagaagctgaaaaaaccgcttcg
gccatcctttcgagaatatgtggggtagcggcaatcaccccgaaactccagcaacgtaaa
cctcccctgccgttcacgacctcacttctgcagcaggctgcatcgaatcagcttggattc
gggtcgaaaaaaaccatgcgtatcgcacagcagctttacgaaggaatcgaaatcggtgca
gaaggtgctacaggtttgatcacctatatgagaaccgattctacaagaatcagctcggaa
gcggtcgaacaggcggagaggtatatcactcagcagtatggaaccgagtatacaggagga
acgaaagcagcgaaaaacagcaaaaaaacgcaagatgcccatgaagccataaggcccact
ctggtttcacacacccctgatgccatgaagcagttcctttctcctgaccagttcaaactg
tacgctcttatctggaaaagatttcttgcatcacggatggctccggcaaagatagaacag
actcgcgttgaagtctccgatcacgaacaacagttcctgttccgcgcaagcggcagcaag
gtgctttttcccggcttcctgaaagtatacaacgagcagaaagagctcgattacgaagcg
agaaaatctacacgcgacgacgaggaaaaagagcagatcgttcagcttcccaaaaaactc
tcggtcaatgaaacgctgaatctggacgacctggagaaaaaacagagtttcacccggcca
ccagcccgatataccgaggcgagcctcgtcaaggaacttgacaactacggcattggacgc
ccgtctacctatgccggtatcttctcgacactccaggatcgacgctatgtcgagctgcag
aagaaaaagatcatcccgactgaactcggcagggatgtttcggtcattctggttgctaac
ttcccggatatattcaatgtcaagtttacagcccacatggaaaatgagcttgacaaggtc
gccaccggagaagatgactatgaagaggtcctcgacagcttctacagacctcttgaaacc
gcactgagcgtcagaaaaaacgatccccttctcccgcagaaccacgatgccgaaacctgt
gacaaatgcggaaaaggaaagatggtgataaagtggactgccagcggaaaatttcttgga
tgttccaattacccgtcatgcagaaacatcaaaccgatagcttcggcaaaagttcgccca
acggaaaccggcatacgatgccccggctgcagcaacggcagaatggtattgcgaaacggt
aggtttgggccgtttcttgcctgtacgaattacccgaaatgcaacaccatactgaagctc
gacaaacaaagaaaaatcgaaccgccaaagacaccgccccttgaaactgatctcgattgt
ccgaaatgcggggcaccgctttacctgagaaccggcaaaagaggactatggcttggatgc
tcaaagtttccgaaatgcagaggaaggcaggcatggggccaacttgatccctcaattcag
caacactggcaggaagcaatggaagagcatcaggcaaagcacccgctggttaccctgcgc
atggttgacggctcgccagtggacatgcggatgagtatcgatgacatcatcgcccgcgcc
gaggaaaacggccttgtcgaaatcgacaacggagaggaacaggagaagcctgcagaagaa
agatag
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