Proteiniborus sp. MB09-C3: QO263_01070
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Entry
QO263_01070 CDS
T09105
Name
(GenBank) collagen binding domain-containing protein
Organism
prom
Proteiniborus sp. MB09-C3
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen_bind
Cna_B
SpaA
Big_9
Big_8
Cadherin_5
Cadherin_4
Gram_pos_anchor
Motif
Other DBs
NCBI-ProteinID:
WIV12346
LinkDB
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Position
complement(219472..224889)
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AA seq
1805 aa
AA seq
DB search
MRIFYRKNKHMMILVVVLAMLVQMVVPGMNYSHAELEIEDDVITVEGVVGDNNDDEDLDS
IVSDDINEEDTEDEGTAIGEDDEEDNSQLPAQATDEGEETEAITGVGLFSAEPKELVNIF
KGVSLKIQHGSGEPVEIRESDIVEIEDNTVILLEFHWEIEDNSDKFELVDGDWAEIAIPT
LFEEHNKMPASGYVIFNVDGDEITVGTYALENNMLKVVFNNELVGLKNRKGDVWLGLQFN
EEIIKGNAKQTITFEEPIDRTYNITVKPKGNNPAIKKSGSPNEPINATYINWVIDVNTSL
DKLSNAIVEDTIPAGLELMEGSIEIYDLTIGYDGEVKEEKLSSKEATGFPIVLGEVDSAY
RIKYKTDIVDSSKNNYDNIATLKDGVNVKGTANCDIGSLQVGKPIDKTGVPENPDESNAG
QNSTKITWTIDVNKAELNLDNVSIDDIILDSRLSIVNSSIRIFKLSKSGKDFVVGDEVTS
VIFSEGTEKKFPFDLGDLNELNGKTYRITFDTNISYTEYHPSNTFSNTAVLKVKGDQKGT
DTATVTVNRETLLEKYGVETTNYGDPEIEWTVHVNRANHSIINATITDTISAGLTLMKND
NGDYDIKIYDHNGVLVSLVDSPGTPSLKDITDNGFVANLGTITTYYKIVYKTKITDPTQA
KDNTAELSGTGLKGDGIGSDNSIRKEATPSNEVKNIYTKEKEESNKTIDTEEGKITYDGL
NHTDKTMSWKITVDAVKEEITELTITDSFFTTADGSIFTPSNSMVFIKDSLRIIKGSEIL
KEDDDYIIQDNGAGGFILSFTNPIDRAKYEIYYKTSFDPNEVLSPESGGELNPNRTYINQ
AVFSGTTKDVKGLNHDINEKRTAKYDINQVVFNGGKKDVDLDRENRKIKWTIYVNALGQD
LTKREPVEFFITDTLSSTDSTDPGQVFDKGSIVVKEYTLNKDGSIIPGAVLPKEDENENY
NYTVAWNDTEHEFTLTFPHGIKKPYMVEFYTNIVGLSKEKYKNSAQITGRVEAYTAEEKY
EDYKTFLIKDAGTTTVYSDDEINWKLTINESLSPIEAGAVLVDTISKGLVYIENSLKIKN
PDGDELFRTTEDTEGDYTLENELNAKGERVLTITFKDGFNTRYFVEYTTVVVAGNGEQIN
NKAVFNGESTTTTDTEDIKFNVTQYSGATGSGVRSGNIKITKYNTENENKKLKDAEFKLY
YLLNGEPYYVKASDGTDIHRTNSQGVLEFKGLNIRTYYLQEVKAPAGYEKMDKEELQEAL
KDYEIVEVNNEEGSKDVSIKLKLDNINKSIVLEVPNNRIKINVEGTKKWLGGSNDKPTIK
LQLYQNSKALGDPKEPIETENGIASCTWENLYKADENGEDYVYTVDEVNVPENYIKSVSD
DGLTVTNTYVSSKIEKTGNKVWVNGPEPKPTIQLRLLQNNVQYGELVTLADGEISYTWTD
LDKTDVHGIDYKYAVEEVSIPEDYGMSVSDDGLTITNTYQSPKRDVIGKKVWVNGPSIRP
TIELQLYRNGIPYGRPVELSGEAISYKWSGLDKTDEKGIDYVYTVDEVNVPENYEKSVSD
KYMTVTNTYIIPKIDITGKKVWIGGSSTRPAIELQLYRDGEAFGEPVKLEDGETEYIWTG
LDKTDIDGKEHKYTIDEVKVPSGYRKSISSDGLTITNSYRPPVDPEPPTKPKEPEKPTEP
PTKPEEPEKPTEPPTKPEEPEKPTEPEPEPKPEPEEPTIVTPPENGTVEFDEDGNWKYTP
NPGFKGKDKFVIRHPDGTEELIEIDVDDIPLGTVLPKTGEGSKIGYYITGLLLVFLGLFL
RRKIV
NT seq
5418 nt
NT seq
+upstream
nt +downstream
nt
atgagaattttttacagaaaaaataaacatatgatgattttagtggttgtattggctatg
ctggttcagatggtagtgcctgggatgaactactcccatgcagagctagagatagaagat
gatgttataacagtagaaggggtagtgggtgacaacaatgatgacgaagatctcgattct
atagtatcagacgatattaatgaagaagatacagaagatgagggtactgctataggtgaa
gatgatgaagaagataatagccagttgccagcccaagcaacagatgaaggggaagaaaca
gaggcaataacgggtgtaggcttattttcagctgagcctaaggaactagtaaatatcttt
aaaggagtatctcttaaaatacaacatggcagtggagaaccagtagagattagagagtct
gatatagtggaaattgaagacaatactgtaatattgcttgaatttcattgggaaatagaa
gataactctgataaatttgaacttgtagatggcgattgggcagagatagctatccccact
ttatttgaagagcataataagatgcctgctagtggttatgtgatatttaatgttgatggt
gatgaaattacagtaggcacatatgccctagagaacaatatgctaaaggtcgtgtttaat
aatgaactagtaggcttaaaaaatagaaaaggcgatgtatggttaggactccagtttaat
gaggaaataataaaaggaaatgcaaaacaaaccattacttttgaggaaccaatagataga
acctacaatataactgtaaagccaaaaggaaacaatccagctataaaaaaatctggtagt
ccaaatgagcctataaatgcaacatacattaactgggtcatagacgtgaatacttcttta
gacaaactaagcaatgcaatagtagaagatacaattccagcaggacttgagttaatggaa
ggaagtatagaaatatatgatttaacaatcggctatgacggagaggtaaaggaagaaaaa
ctatctagtaaagaagcaacaggatttccaatagtattaggagaggtagattctgcctat
agaatcaaatataagaccgatattgtagactcttcaaaaaataattatgataacattgcc
acattaaaagatggagtcaatgtaaagggaacagcaaattgtgacataggcagtctgcaa
gtaggcaaacctatagacaaaacaggcgttccagaaaatcctgatgaaagtaatgcaggt
caaaactctacaaagattacatggaccatagatgtaaacaaggctgaactgaacttagat
aatgtgtctatagatgatataattttagattctagattatctattgttaatagttccatt
aggatttttaagcttagcaaaagtggtaaggattttgttgttggagatgaagtgacgagt
gtaattttctctgagggcactgaaaagaagttcccatttgatttaggagatttaaatgaa
ttaaacggaaaaacctatagaataacctttgatacaaatatatcctatacagagtatcac
ccctcaaatacattttcaaatacagcagtactaaaagtaaaaggagatcaaaaaggaaca
gacacagctactgttactgtaaacagagagaccctgttagaaaagtatggagtggaaacc
acaaactacggagatcctgaaatagaatggactgtccatgtaaatagggctaatcacagt
ataataaatgctacaataacagacactataagtgcggggcttacactaatgaaaaacgac
aatggtgactatgatattaaaatatatgaccataatggggttttagtttcattagtagat
tcaccagggacaccaagtctaaaggatataacagataatggatttgtagccaatttagga
actataactacttattacaaaatagtatataaaactaaaataactgatcctacacaagct
aaagacaatacagcagagctatctggaactggattaaaaggagatggaataggttcagat
aacagcatacggaaagaagctactccaagtaacgaagtaaaaaatatctacacaaaagag
aaagaagaatcaaacaagaccatagacactgaagaaggcaaaataacctatgacggacta
aatcacacagataaaaccatgagctggaagattactgtagatgctgttaaagaggagata
acagaacttacaattacagattccttttttacaactgctgatggttccatatttactcct
agcaacagtatggtgtttataaaagattccttgaggataattaagggttctgaaatttta
aaggaagatgatgattatattattcaagataatggtgcaggtggattcatcttatcattt
acgaatcctatagatagggctaaatacgaaatttactataaaacttcctttgaccctaat
gaagtattatcacctgaaagtggaggcgaactaaatccaaatagaacatatataaaccaa
gctgttttttcgggcaccactaaggatgtaaagggtttaaatcatgacataaatgagaaa
agaacagccaaatacgacataaatcaagtggtattcaatggcggcaaaaaagatgtagac
cttgacagagaaaatagaaaaatcaaatggaccatctatgtaaatgccctaggtcaggat
ttaacaaaaagagaaccagtagaattttttatcaccgatactctcagttctacagactct
acagatccaggtcaggtatttgataaaggttctatagtcgttaaggagtatactctaaac
aaggatggcagtataattcctggtgctgtcctgcctaaagaagatgaaaacgaaaattac
aattatactgttgcttggaatgatactgaacatgaatttactcttacatttcctcatggc
ataaagaaaccgtatatggtagagttttataccaacattgttggactatccaaagaaaag
tataaaaactctgcgcagattacaggcagagttgaagcatatacagcagaggagaaatat
gaggactataagaccttccttattaaagatgcaggcacaactacagtatattcagatgat
gaaattaactggaaacttaccataaatgaaagcttatctcctatagaggctggtgcagtt
ttagttgatactataagtaaaggcttagtgtatatagaaaacagcttaaagattaaaaat
cctgatggagatgaactattcagaacaaccgaagatactgaaggtgattatactctagag
aacgaattaaatgcaaagggagaaagagtattgaccataacctttaaggatgggtttaat
actagatactttgttgagtacactaccgtagtagttgctggaaatggagagcagataaat
aacaaagcagtatttaatggtgaaagtactacaaccacagatacagaggatataaaattc
aacgtaactcaatattcaggtgcaacgggcagtggtgtacgttcaggaaatataaagatt
accaaatataatacagaaaatgagaataaaaagcttaaagatgcagaatttaaactatac
tatttactaaatggagaaccttattacgttaaagccagtgatggtaccgatatacatcgc
acaaatagtcagggagttctagaatttaaaggattaaatataagaacctactatttgcaa
gaagtaaaagcaccagcaggctatgaaaaaatggataaggaagaactacaagaagcatta
aaagactatgaaatagtagaagtaaacaacgaagaaggtagcaaagatgtcagcataaag
ctaaaattggacaatattaacaaatcaattgtattagaagttccaaacaacagaataaaa
atcaatgtagaaggaactaaaaagtggttgggtgggtcaaatgacaagccaactataaaa
cttcaactataccaaaacagcaaagctcttggtgatccaaaagaaccaatagagacagaa
aatggaattgcaagctgtacttgggagaatctatataaggcagatgaaaatggtgaggac
tatgtctacacagtagacgaagtaaatgttccagagaattatataaagtctgtttcagat
gatgggctaacagtaactaacacttatgtatcttcgaagatagaaaaaacaggtaataag
gtatgggtaaatggtccagaaccaaaaccaactatacagttacgattgcttcaaaacaat
gttcagtatggagaattagtaaccttagctgatggagaaatatcctatacttggactgat
ttagataagaccgatgtacatgggatagattacaaatacgcagtagaagaagtaagcatt
ccagaagattatggtatgtcggtatcagatgatggattaactataaccaatacctaccaa
tcaccaaagagagatgtaataggtaaaaaggtatgggtgaatgggccgtctattagacca
actatagaattacagttatataggaatggaattccatatggtagacctgtagaactaagt
ggtgaggcaattagttacaaatggtcaggtttagataaaacagatgaaaaaggtattgat
tatgtttacactgtggacgaagtaaatgttccagaaaactatgagaagtcagtttcagat
aaatatatgacagtaaccaatacctatataatacctaagatagacataacaggtaaaaag
gtatggattggtggatcaagtacaagaccagccatagagctgcaactatacagagatggt
gaagcttttggggaaccagtaaaattagaagacggagaaacagaatatatctggactggc
ttagacaaaacagatatagatggaaaagaacataaatatacaatagacgaggtaaaagtt
ccaagtggctacagaaagtcaatatctagcgacggactaactatcacaaatagttatcgt
ccaccagtagacccagaaccaccaacaaaaccaaaagaacccgagaaaccaacagaacca
ccaacaaaaccagaagaaccagagaaaccaacagaaccaccaacaaaaccagaagagcca
gaaaaaccaactgaaccagagccagaacctaaaccagaaccagaagaaccaacaatagtc
acaccaccagaaaacggaacagttgagtttgacgaagatggcaactggaagtacactcca
aaccctggatttaagggcaaggataaatttgtcataagacatccagatgggacagaagag
ctcatcgagatagatgtagacgatatcccattaggcacagtacttcctaaaactggggaa
ggcagcaaaataggatattatataacaggattactattagtatttctaggactattccta
agaagaaaaatagtataa
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