Proteiniborus sp. MB09-C3: QO263_08545
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Entry
QO263_08545 CDS
T09105
Name
(GenBank) endonuclease VIII
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
prom
Proteiniborus sp. MB09-C3
Pathway
prom03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
prom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QO263_08545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prom03400
]
QO263_08545
Enzymes [BR:
prom01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
QO263_08545
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
QO263_08545
DNA repair and recombination proteins [BR:
prom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
QO263_08545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
WIV13729
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All DBs
Position
1775620..1776447
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AA seq
275 aa
AA seq
DB search
MIELPEAITIAQQINETISGKKIKDVIAAQSPHKFAWYHGDPQEYYDLLVDKVIGEAAGF
GGLVEINVEDAVILLGDGINLRLHGEKEKRPQKHQLLIEFEDFTAISASVQMYGGIWCFK
EGEFKNTYFLQAKSKPSPLSDKFDKAYFDSIISALEVEKLSAKAFLATEQRIPGLGNGVL
QDILYNARIHPKKKIRAFTAENRDNLYDSIKSTLAEMTFLGGRDTERDLFGCFGSYKTKL
SKNTVDKPCPICDTIIKKEAYMGGSIYYCSECQKN
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgatagaattaccagaagctattactatagctcaacagattaatgaaactatcagtgga
aaaaaaattaaagatgttattgcagctcagtctcctcataaatttgcatggtatcatggt
gatccacaagagtattatgatttgcttgtggacaaggtaataggagaagcagcaggtttt
ggaggtcttgtagaaatcaatgtagaggatgctgtgatattattgggagatgggataaac
ttgaggcttcatggagaaaaggaaaaacggcctcagaagcaccaactattaattgagttt
gaagattttacagcaataagtgcatcagttcagatgtatggtggaatatggtgttttaaa
gaaggagaattcaaaaatacatattttctacaagcaaagagtaagccttcaccactttca
gataaatttgacaaagcatattttgacagtattatttcagcccttgaggttgaaaaactt
agcgcaaaggcatttcttgcaacagagcaaagaatacctggccttgggaatggcgtgtta
caggatattctctataatgctagaatccatccaaagaagaagataagagcgtttactgca
gagaatagggataatctttatgattcaataaaatctactcttgcagaaatgactttcctt
ggcggtagagatactgaaagagatttgtttggatgttttggcagctataaaactaagctt
agtaaaaacactgtcgataaaccatgtccaatatgtgatactatcattaaaaaagaagct
tatatgggtggaagtatatactattgcagtgaatgtcagaaaaactag
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