KEGG   Proteiniborus sp. MB09-C3: QO263_09080
Entry
QO263_09080       CDS       T09105                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
prom  Proteiniborus sp. MB09-C3
Pathway
prom03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:prom00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    QO263_09080
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:prom03019]
    QO263_09080
   03009 Ribosome biogenesis [BR:prom03009]
    QO263_09080
Enzymes [BR:prom01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     QO263_09080
Messenger RNA biogenesis [BR:prom03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     QO263_09080
Ribosome biogenesis [BR:prom03009]
 Prokaryotic type
  rRNA helicases
   QO263_09080
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII CMS1 Cas3-like_C_2 AAA_19 ORC1_wHTH
Other DBs
NCBI-ProteinID: WIV13833
LinkDB
Position
complement(1893206..1894819)
AA seq 537 aa
MKNLAFTELNLSSEIERAVAEMGFEEATPIQSQSIPYIMDGRDIIGQAQTGTGKTCAFGI
PAIEMVNPKNESIQTLILCPTRELAIQISEELKNVSKYKKGIKILPVYGGQPIERQIAAL
KKRPQIIIGTPGRLMDHMRRRTIKLMDLKMVVLDEADEMLNMGFREDIDEILEKIPVDRQ
TVLFSATMSKEIMDLTSKYQKDAILVKSVHKELTVPRIEQYYLEIRESAKLDVLSRIIDK
EGIKLALVFCNTKKRVDELTSGLQSSGYMAEALHGDMKQSQRDRVMSRFRSGAIEILVAT
DVAARGIDVDDVEAVFNYDIPNDEEYYVHRIGRTGRAGKTGRAFTFVSGREFYRLKDIQR
YTKSKITLMSPPSLSDIEESKVNNVISDLKAVLARNNLSKYVSYIEKILEDTHVDNKENY
TTTIDVAAALLKLVVTDNGKNDFTDSDKLDYKETGAEKGMARLFINMGSRDRIQPRHIVE
AIASKSSLPGKKIGAIDIFDKFSFVDIPLEYVQEVLSPKMSFRIKGKKVSIEKANRK
NT seq 1614 nt   +upstreamnt  +downstreamnt
atgaaaaatttagcttttacagaattaaatctatcttcagagatagaaagagcagttgct
gaaatgggtttcgaggaagcaactccaatacaatctcaatctataccttacataatggat
ggaagagatataataggtcaggctcagactggtacagggaaaacatgtgctttcggtatc
cctgctattgaaatggtaaacccaaaaaatgaaagcatacagacattaatcttatgtcct
acaagagaactcgctatacagatatcagaggaactaaagaatgtgtccaaatacaaaaag
gggattaaaatccttcctgtttatggtggtcagccaatagagcgtcaaatagctgcacta
aaaaaacgtcctcagatcatcataggaacaccaggaagattgatggatcacatgagaaga
cgtaccattaaattaatggatttaaaaatggtagtattagatgaagcagacgaaatgcta
aatatgggttttagagaagatatcgatgaaattcttgaaaaaataccagttgacagacag
actgttcttttctctgctactatgtcaaaagaaatcatggacttgacatcaaagtatcaa
aaagacgctattctagttaaatcagttcacaaggagcttacagttccaaggattgaacag
tattatctggaaattagggagtctgcaaagctagatgtcctttcaagaattatagacaag
gaaggtattaaactggcgcttgttttctgcaacaccaagaagcgagttgatgaactaact
tctgggcttcaatccagtggttacatggcagaggctctacatggggacatgaagcagtct
caacgtgatagggtaatgtcacgatttagaagcggtgcaattgaaatcttagtagctact
gatgttgctgcacgtggaattgacgtagacgatgttgaagcagttttcaactatgacatt
cctaatgatgaggaatactatgttcatagaataggtagaactggtagagctggaaagaca
ggtagagcttttacatttgtatctggcagagagttctatagattgaaggacatacaaaga
tacacaaaatcaaaaattactcttatgagtcctccatctttatctgatattgaagagagt
aaagtaaataatgttattagtgatttaaaagctgttttggcaagaaataatctttcaaaa
tatgtgagctatattgaaaaaatacttgaagacactcatgtagataataaggaaaattat
acaactaccatcgatgtagctgctgcattacttaaattagtagtaactgacaatggtaaa
aatgattttactgattcagataaactggattataaggaaactggtgctgaaaagggtatg
gcaaggctatttattaacatgggaagtagagacagaatacagcctagacatatagtagaa
gctattgcctcaaagagtagtcttcctggaaagaaaattggtgcaatagatatttttgat
aagttttcttttgtagatatacctttagaatatgttcaggaagtgctgtcaccaaaaatg
agctttaggataaaaggtaagaaagtttccatagaaaaggctaatagaaagtaa

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