Proteiniborus sp. MB09-C3: QO263_09080
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Entry
QO263_09080 CDS
T09105
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
prom
Proteiniborus sp. MB09-C3
Pathway
prom03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
prom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QO263_09080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prom03019
]
QO263_09080
03009 Ribosome biogenesis [BR:
prom03009
]
QO263_09080
Enzymes [BR:
prom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QO263_09080
Messenger RNA biogenesis [BR:
prom03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QO263_09080
Ribosome biogenesis [BR:
prom03009
]
Prokaryotic type
rRNA helicases
QO263_09080
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
AAA_19
ORC1_wHTH
Motif
Other DBs
NCBI-ProteinID:
WIV13833
LinkDB
All DBs
Position
complement(1893206..1894819)
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AA seq
537 aa
AA seq
DB search
MKNLAFTELNLSSEIERAVAEMGFEEATPIQSQSIPYIMDGRDIIGQAQTGTGKTCAFGI
PAIEMVNPKNESIQTLILCPTRELAIQISEELKNVSKYKKGIKILPVYGGQPIERQIAAL
KKRPQIIIGTPGRLMDHMRRRTIKLMDLKMVVLDEADEMLNMGFREDIDEILEKIPVDRQ
TVLFSATMSKEIMDLTSKYQKDAILVKSVHKELTVPRIEQYYLEIRESAKLDVLSRIIDK
EGIKLALVFCNTKKRVDELTSGLQSSGYMAEALHGDMKQSQRDRVMSRFRSGAIEILVAT
DVAARGIDVDDVEAVFNYDIPNDEEYYVHRIGRTGRAGKTGRAFTFVSGREFYRLKDIQR
YTKSKITLMSPPSLSDIEESKVNNVISDLKAVLARNNLSKYVSYIEKILEDTHVDNKENY
TTTIDVAAALLKLVVTDNGKNDFTDSDKLDYKETGAEKGMARLFINMGSRDRIQPRHIVE
AIASKSSLPGKKIGAIDIFDKFSFVDIPLEYVQEVLSPKMSFRIKGKKVSIEKANRK
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatttagcttttacagaattaaatctatcttcagagatagaaagagcagttgct
gaaatgggtttcgaggaagcaactccaatacaatctcaatctataccttacataatggat
ggaagagatataataggtcaggctcagactggtacagggaaaacatgtgctttcggtatc
cctgctattgaaatggtaaacccaaaaaatgaaagcatacagacattaatcttatgtcct
acaagagaactcgctatacagatatcagaggaactaaagaatgtgtccaaatacaaaaag
gggattaaaatccttcctgtttatggtggtcagccaatagagcgtcaaatagctgcacta
aaaaaacgtcctcagatcatcataggaacaccaggaagattgatggatcacatgagaaga
cgtaccattaaattaatggatttaaaaatggtagtattagatgaagcagacgaaatgcta
aatatgggttttagagaagatatcgatgaaattcttgaaaaaataccagttgacagacag
actgttcttttctctgctactatgtcaaaagaaatcatggacttgacatcaaagtatcaa
aaagacgctattctagttaaatcagttcacaaggagcttacagttccaaggattgaacag
tattatctggaaattagggagtctgcaaagctagatgtcctttcaagaattatagacaag
gaaggtattaaactggcgcttgttttctgcaacaccaagaagcgagttgatgaactaact
tctgggcttcaatccagtggttacatggcagaggctctacatggggacatgaagcagtct
caacgtgatagggtaatgtcacgatttagaagcggtgcaattgaaatcttagtagctact
gatgttgctgcacgtggaattgacgtagacgatgttgaagcagttttcaactatgacatt
cctaatgatgaggaatactatgttcatagaataggtagaactggtagagctggaaagaca
ggtagagcttttacatttgtatctggcagagagttctatagattgaaggacatacaaaga
tacacaaaatcaaaaattactcttatgagtcctccatctttatctgatattgaagagagt
aaagtaaataatgttattagtgatttaaaagctgttttggcaagaaataatctttcaaaa
tatgtgagctatattgaaaaaatacttgaagacactcatgtagataataaggaaaattat
acaactaccatcgatgtagctgctgcattacttaaattagtagtaactgacaatggtaaa
aatgattttactgattcagataaactggattataaggaaactggtgctgaaaagggtatg
gcaaggctatttattaacatgggaagtagagacagaatacagcctagacatatagtagaa
gctattgcctcaaagagtagtcttcctggaaagaaaattggtgcaatagatatttttgat
aagttttcttttgtagatatacctttagaatatgttcaggaagtgctgtcaccaaaaatg
agctttaggataaaaggtaagaaagtttccatagaaaaggctaatagaaagtaa
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