Proteiniborus sp. MB09-C3: QO263_12175
Help
Entry
QO263_12175 CDS
T09105
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
prom
Proteiniborus sp. MB09-C3
Pathway
prom03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
prom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QO263_12175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prom03019
]
QO263_12175
03016 Transfer RNA biogenesis [BR:
prom03016
]
QO263_12175
Enzymes [BR:
prom01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
QO263_12175
Messenger RNA biogenesis [BR:
prom03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
QO263_12175
Transfer RNA biogenesis [BR:
prom03016
]
Prokaryotic type
tRNA degradation factors
QO263_12175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
KH-I_KHDC4-BBP
CTD4
OB_RRP5_4th
SPATA25
CYP38_PsbQ-like
Motif
Other DBs
NCBI-ProteinID:
WIV10908
LinkDB
All DBs
Position
2498241..2500346
Genome browser
AA seq
701 aa
AA seq
DB search
MERTFESTISGRKLSVTIGKVAEQAGGSCLVRYGDTVVLATATASKEPREGIDFFPLSVD
YEERLYAAGKIPGGFIKREGKPSEKAILTSRLIDRPIRPLFPKDFRNDVQVIVTVLSVDQ
DCTPDIVSMVGASIALTISDIPFNGPTGAVAIGLIDNKLIINPTCEQREKSALSLIVSGT
EEAVMMVEAGANEIDEAVMLDAIMTGHDEIKKICQFINEISKEVGKPKKEYKAFHADKEI
EEAIIGYARDKMLNAIRTEDKQERQENIDNVKKETFEYFIEEYPENATDIEEVLYNIVKE
EVRKLIVEEGIRPDNRHVDEIRKITSEVGILPRTHGSGLFTRGQTQVLTVATLGAAGDVQ
IIDGLGEEEEKRYMHHYNFPPYSVGETRFLRGPGRREIGHGALAERALEPVIPSVEKFPY
TIRLVSEVLSSNGSTSQASVCGSTLALLDAGVPITAPVAGIAMGLIKSEEKVVILTDIQG
MEDFLGDMDFKVAGTEKGITAIQMDIKIAGIDKEILKNALEKARVGRLFILNKMSEVISE
PRKDLSPYAPRILTMTVNPDKIRDIIGPGGKIINKIIDETGVKIDIEDDGKVIIAANNIE
FGKKAMKMIEKIVEEIEVGKIYLGKVTRIMPFGAFVEVLSGKEGLVHISNIARERINKVE
DVLSVGDEILVKVTEIDNQGRVNLSRKDALPNEEKNEGEQK
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggagagaacttttgaaagtactataagtggaagaaagctttcggttacaataggtaag
gtagcagaacaggctggtggttcatgcttagttagatatggcgatactgttgtattagct
acagctacagcttcaaaagaaccaagagaaggtattgactttttccccttaagtgttgat
tatgaagagagactttatgcagcggggaaaatacctggaggatttattaagagggaaggt
aagcctagtgaaaaagcaattttaacttcaaggcttattgatagaccaatcaggcctcta
ttcccaaaggattttagaaatgatgtgcaagtaattgtcactgttttatcagttgatcaa
gattgtactcctgatatagtgtctatggtaggtgcgtctattgctcttactatatcagat
ataccttttaacggtcctactggtgcagtagcaatcggcttaattgataataagcttatt
atcaatcctacttgcgaacaaagagaaaaatctgcattgagtttaattgtgtccggaact
gaagaagcggtaatgatggttgaggctggagcaaatgaaatagatgaagctgtgatgcta
gatgcaataatgactggacatgatgaaataaagaaaatatgtcaatttattaatgaaatc
agtaaagaagtaggtaagcctaaaaaagaatataaagcttttcatgcagataaagaaatt
gaagaagcaataataggatatgctagagataaaatgctaaatgctataagaacagaagat
aaacaagagagacaagaaaatatagataatgtaaaaaaggaaacatttgagtatttcatt
gaggaatatcctgaaaatgctactgatattgaagaagtgctatataatattgttaaagaa
gaagttagaaagcttattgttgaagagggaattaggccagataatagacatgtagatgaa
ataagaaaaattactagtgaagtagggatattaccaaggactcatggctctggattgttt
actagaggacagactcaagttttaactgttgcaaccctaggagctgctggagatgttcaa
attatagatggacttggagaagaagaagaaaaaagatatatgcatcactacaattttcct
ccttatagtgttggagagacaagatttttaagaggtcctggaagaagagaaataggccat
ggtgcattagcagagagagctcttgaaccagttattcctagtgttgaaaagttcccttat
acaataagattggtttcagaagtattaagctcaaatggctctacatcacaggcaagtgtt
tgtggaagtactttagccttattagatgcaggagtacctataactgcaccggtagctggt
attgcaatgggtctaataaagtctgaagaaaaagtagtaatattaacagatattcaagga
atggaagatttcctaggtgatatggacttcaaagttgctggaacagaaaagggtataaca
gctatacagatggatataaaaatagcaggtattgataaagaaatacttaaaaatgcacta
gaaaaagcaagggtagggagactatttattcttaataagatgagtgaagtcatttcggaa
ccacgaaaagatttatctccttatgctcctagaatattaacaatgactgtaaacccagat
aaaataagagatatcattggtcctggcggaaagataattaataagattattgatgaaaca
ggagttaaaatagatattgaagatgacggaaaagtaatcatagcagcaaataatattgaa
tttggaaaaaaagctatgaaaatgatagagaaaatagtagaggaaatagaggtaggtaaa
atatacctaggaaaggtgactagaataatgccttttggtgcctttgtagaagtattaagt
ggaaaagaaggcttagttcatatatcaaatatagcaagagagagaataaataaagtagaa
gatgttttatcagttggagatgaaatattagtaaaggtaacagaaatagataatcaaggt
agagtaaacctttctagaaaagatgcacttccaaatgaagagaaaaatgagggtgaacaa
aaataa
DBGET
integrated database retrieval system
