Proteiniborus sp. MB09-C3: QO263_12230
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Entry
QO263_12230 CDS
T09105
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
prom
Proteiniborus sp. MB09-C3
Pathway
prom03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
prom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QO263_12230 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prom03019
]
QO263_12230 (rny)
Messenger RNA biogenesis [BR:
prom03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
QO263_12230 (rny)
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Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
KH_KhpA-B
HDOD
Motif
Other DBs
NCBI-ProteinID:
WIV10919
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Position
2512138..2513664
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AA seq
508 aa
AA seq
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MIAGAVGGLAVGTVLGIYLRKTIAEAKIINAEEEASRIVDEAKKQSETLKKEQLLEAKEE
VHKARNELEREIRERRMEIQKQERRLLHKEESIDRKSETLEKKEDQLAKKIKDLEQKDLA
IEELYVKQVEELERISNLTSDEARELLLNDIRKEITHDAAIMIKDIENKAKEEGEKKARE
IIAYAIQKCAADHVAETTVTVVSLPNDEMKGRIIGREGRNIRTLETLTGIDLIIDDTPEA
VILSGFDPIRREVARVALEKLIIDGRIHPARIEEMVEKAKKEVDNHIREQGEQATFETGV
HGLHIEIIKLLGRLNYRTSYGQNVLKHSIEVSHLAGLMAAELGADIKIAKRAGLLHDLGK
AVDHEVEGPHVAIGADLLKKYRESKEVIHAMEAHHGDVEPETVEAVLVQAADAISAARPG
ARRETLEAYIKRLEKLEEIANSFEGIEKSFAIQAGREIRIMVKPELINDDQIIHTAREIV
KRIESELEYPGQIKVNVIRETRAIEYAK
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
gtgattgcaggagctgttggtgggctagcagttggaactgtcttaggtatatacttaagg
aaaacaattgctgaagcaaagataataaacgcagaggaagaggcttcaagaatagtcgac
gaggcaaaaaaacagtcagagaccttaaaaaaagaacaacttcttgaagcaaaggaagaa
gttcataaggcaagaaatgaattagaaagagaaattagggaaagaagaatggagattcag
aagcaagaaagaagattgcttcataaggaagaatccattgatagaaaaagtgaaacatta
gagaaaaaagaagatcaattggcaaagaaaattaaggatttagagcaaaaagatttagca
attgaagaattatatgttaagcaagtcgaagaattagagagaatatctaatttaacatca
gatgaagctagagaattattattaaacgatatcagaaaagaaataactcatgatgcagcg
ataatgatcaaggatatcgaaaataaggcaaaagaagaaggcgagaaaaaagcaagagaa
ataatcgcctatgcaattcaaaaatgtgctgctgatcatgtagcagaaactacagttaca
gtagtttcattgccaaatgacgaaatgaaaggtagaattataggtcgggaaggcagaaat
atcagaactttggaaactttaactggtattgatttgataattgatgatactcctgaagca
gttattttatctggatttgacccaattagaagggaagtagcaagggttgctctagaaaag
cttataattgatggacgtatacatcctgcaaggatagaagaaatggttgaaaaagctaaa
aaggaagtagacaaccatatcagagagcaaggagagcaagctacatttgaaacaggagta
catggacttcatatagaaataattaagcttttaggtagattaaactataggactagttat
ggacaaaacgtacttaaacactctatagaagtatcgcatttagcggggttaatggctgca
gaactaggcgcagatataaaaatcgctaaaagagcgggacttttacatgatttaggaaag
gctgtagatcatgaggtagaaggtccacatgttgctataggagcagatttgttaaagaaa
tatagagaatctaaagaagtaattcatgccatggaggcacatcatggagatgttgaacca
gaaaccgttgaggctgttttagttcaagcagcagatgcaatatcagctgcaagaccagga
gcaagaagagaaacgttagaagcttatattaaaaggctagaaaaactagaagaaatagct
aattcttttgaaggtatagaaaaatcatttgctatacaagcaggtagagaaattagaatt
atggttaaacccgaactcattaatgatgaccagattattcatacagctagagaaatagtt
aagagaatagaaagtgaactagaatatcctggacaaattaaagtgaatgttataagagaa
acaagagctattgaatatgcaaaatag
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