Proteiniborus sp. MB09-C3: QO263_16330
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Entry
QO263_16330 CDS
T09105
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
prom
Proteiniborus sp. MB09-C3
Brite
KEGG Orthology (KO) [BR:
prom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
prom03016
]
QO263_16330
Enzymes [BR:
prom01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
QO263_16330
Transfer RNA biogenesis [BR:
prom03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
QO263_16330
Prokaryotic type
tRNA splicing ligases
QO263_16330
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RtcB
DUF1803
Apis_Csd
DUF4367
Motif
Other DBs
NCBI-ProteinID:
WIV11650
LinkDB
All DBs
Position
complement(3289265..3290455)
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AA seq
396 aa
AA seq
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MIEINGKHNTAKVFTDNIDEGAMAQIIELCNQEFARDSVIRIMPDAHAGAGCTIGTTMTI
SDKIVPNLVGVDIGCGMETIKLKQRMIDLDKLDKIIYEYIPSGFCIRKEQHKYAENIDFD
DLACKNHVNLNRAKLSIGTLGGGNHFIEVNKDKYGELYLVVHSGSRHLGKQAAEYYQELG
YKELVRENKLKVEIVNRLKKEGREKEIYDEIQKVSTDKINKQLAYVKGDNYNNYLYDMKI
IQQFAVYNRKAIVHEIMSRMNLEAKEQFTTIHNYIDLNSMILRKGAISARKGEKVLIPIN
MRDGSLICIGKGNKDWNFSAPHGAGRLMSRRQAKEAISLEEFEKSMDGIYSTTVNKSTLD
ECALAYKPMDEIINNIQDTAQVLDVIKPIYNFKASE
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaattaatggaaaacataatactgctaaagtctttacagataatatagatgaa
ggagcaatggctcagattatagaattatgcaatcaggaatttgcaagggatagtgttatc
agaatcatgccagatgctcatgctggtgcaggctgtactataggtacaaccatgacaata
tctgataaaattgtgcctaatttagttggtgtggatataggctgcggaatggaaaccata
aagttaaagcaaagaatgattgatttagataaattagataagattatttatgaatatatt
ccatcaggtttttgcattagaaaagaacagcataaatatgctgaaaatattgattttgac
gatttagcctgtaaaaatcatgtcaatcttaatagagcaaagcttagcattggaacctta
ggagggggcaatcacttcatagaagtcaacaaagacaaatacggagagctatacttggtt
gttcactctggaagtaggcatttaggaaaacaggctgccgagtactatcaggaattagga
tacaaagagcttgtaagagaaaataagcttaaggtagaaattgttaatagattaaagaaa
gaaggacgagaaaaggaaatctacgatgaaattcagaaagtaagtactgataagattaat
aaacaattggcctatgtaaaaggagataattataataactacctatatgacatgaaaata
attcaacagtttgctgtatacaatcgcaaagccattgtccatgagattatgagcagaatg
aatcttgaagcaaaggaacagtttactactatacacaactacattgatttaaacagcatg
attttaagaaagggtgctatttctgcgaggaagggagaaaaagtgttgattccaataaat
atgcgagatggaagtctaatttgcattggaaaaggaaataaggactggaatttctcagct
cctcatggagcaggaaggcttatgagtagaagacaagctaaagaagctattagtcttgaa
gaatttgaaaaatcaatggatggtatatatagcactactgtaaacaagtcaactttagat
gaatgtgcactagcatacaagcctatggatgagatcatcaacaatattcaggatacagcc
caagtacttgatgttataaaaccgatatacaattttaaagccagtgaataa
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