Proteiniborus sp. MB09-C3: QO263_17655
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Entry
QO263_17655 CDS
T09105
Name
(GenBank) 3'-5' exonuclease
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
prom
Proteiniborus sp. MB09-C3
Pathway
prom03420
Nucleotide excision repair
prom03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
prom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QO263_17655
03430 Mismatch repair
QO263_17655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prom03400
]
QO263_17655
Enzymes [BR:
prom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QO263_17655
DNA repair and recombination proteins [BR:
prom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QO263_17655
MMR (mismatch excision repair)
Other MMR factors
QO263_17655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
Intein_splicing
UvrD_C_2
AAA_30
AAA_11
ResIII
Hint_2
AAA_14
Hint
Motif
Other DBs
NCBI-ProteinID:
WIV11898
LinkDB
All DBs
Position
complement(3592857..3596147)
Genome browser
AA seq
1096 aa
AA seq
DB search
MNFLDGLNDKQREAVLATEGPLLVLAGAGSGKTRVLTHRIAYIIQEKGVRPYNILALTFT
NKAANEMKERIARLIGDEAENIWAGTFHSICVRILRRDIEKLGYGKNFVIFDTTDQKTLI
KDCIKELNLNEKMYEVAAMMGFIGSQKDNLVEPDTYINQNYGDFRERQKGEIYSLYQKKL
KENNALDFDDLINKTIELFKQFTNILEFYQDKFKYILVDEYQDTNRAQYILINLLSKKYN
NICVVGDDDQCILQGMLVNTPDGSIPIEQLLEGQRVYSPSGWGNVLEGIVEKKIEKEYSG
PIVKIKTQKGNVIKTTPNHIMFGKLNVQPGVYYVYLMYKKGKGYRIGQTQGVRSREGEII
NGLMVRLNQEHGDKAWILKICNSKEETVFYEQLYSFKYGIPTTVFHNVGRGISLTQNYID
ELFSEIDTESNAIKLMNDLLIFEEFPHHRPNAIISGGTIRRLVNLTFFGGRITGADKGWH
SHRIAFNTSNDELEEKARRAGFPVRKGQRNTWRIETERIYYDETNVYGKSIQELDNGIEI
VRRARLTEDESFYYMPASHIKPSMSIAAFQDGKIIEDIVEEVSIEEYDGYVYDISVPNFR
QYLCQGIAVHNSIYGWRGADIRNILDFEKDYSNAEVIKLEQNYRSTKTILNAANQVIENN
EGRKSKRLWTANDEGCLIKIFSGANEHEEANFIVDKIKEVSEKEDKKLSDFAILYRTNAQ
SRVIEEAFLKANIPYKIVGGHKFYDRKEIKDIIAYLRLIQNPVDNYAFKRIVNVPKRGLG
KTTLDRLEQYSIKKEDSIFGAMLECDEIPGLTPRAKDSLNSFSLLIRKFMAMKELFTVTE
LIENIIDSIGYIEEIQQEETVQAESRIENIKEFLSVAVNFEETSEDKTLEGFLANISLLS
DLDKTDENDRDTVTMMTLHSAKGLEFPVVFMTGMEESLFPTSRAYFSEDDMEEERRLCYV
GITRAEEMLFMTRAFSRMLYGKTGVNSMSRFLREVPDEFIEDLNESEASTVSTIPTKINV
NTSSKYFAGYTVENTRKAPVVSNLDVKPGTKVNHKAWGIGTVVQVKDLDNDKELIIAFNS
QGIKKLMLSFAPIEIL
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atgaattttctagatggacttaatgataaacagagagaagcggtattggctacagaagga
ccactgttagttcttgctggtgcaggtagtggaaagacaagggtacttactcatagaata
gcatatataatacaagaaaaaggagtaaggccatataatatacttgctcttacttttacg
aataaggcagcaaatgaaatgaaggaaagaattgcaagattaattggggacgaagcagaa
aacatttgggcaggtacatttcactcaatatgtgtgagaatacttagaagagatattgag
aagcttggatatggaaaaaatttcgtcatatttgatacaacagatcaaaagactttaatc
aaggactgtatcaaggaattgaatctaaatgaaaaaatgtatgaagtagctgcaatgatg
ggcttcatagggtcacaaaaagataatctagtagaaccagatacctatataaatcaaaac
tatggcgattttagagagagacaaaaaggagagatatatagcctctatcaaaaaaagctt
aaggaaaacaacgctttagactttgatgatttaattaataaaactatagaactatttaaa
cagtttacaaatatactcgaattttatcaggataaatttaagtatatattagttgatgaa
tatcaagatacaaacagagcacagtatatactaatcaatttattgtcaaagaaatataat
aacatctgtgtggtgggagatgatgaccaatgtattcttcaaggtatgttggttaatacg
ccggacggcagcatacctattgaacaacttttagaggggcaaagggtttactcaccgtct
ggctggggaaacgtgttagaaggaattgtagaaaaaaagatagaaaaagaatattcgggt
ccaatagtaaaaattaaaactcaaaaaggaaatgttattaagacaactcctaatcatatt
atgtttggaaagctaaatgttcaacctggagtatattatgtttaccttatgtacaaaaaa
ggaaaaggatacagaatcggacaaacacaaggagttagaagcagagaaggtgagattatt
aatggtttaatggtgagattaaaccaagaacatggagataaggcttggattcttaaaata
tgtaacagcaaagaagaaacagttttttatgagcagttatattcatttaagtatggaata
cctactactgtatttcataatgttggtagagggatttcattaactcaaaactatatagat
gaactatttagtgaaatagatacagaaagtaatgccattaagctaatgaatgatctccta
atttttgaagagtttccacaccatagacctaatgctataattagtggaggaactataaga
agacttgtaaacttaaccttttttggagggagaataacaggcgcagataaaggttggcat
agccatagaatcgcatttaacacttctaatgatgaactggaagaaaaagctagaagggca
ggcttccctgtgaggaaagggcaaaggaatacttggagaattgaaactgagagaatatac
tatgatgaaactaatgtgtatggaaagagtattcaagaattggataacggaatagagata
gtgagaagggcaagattaactgaggatgaaagcttttactatatgccagcttctcacatc
aagccatcaatgagtatagctgcattccaagatggtaaaataatagaagatattgttgaa
gaagtttcaattgaagaatatgatggatatgtttatgatatctctgtacctaattttaga
caatatttgtgccaaggtatagctgttcataactccatatatggatggcgcggggctgat
atcagaaatatcctagactttgaaaaggattattcaaatgcagaggtcatcaaactagaa
caaaactaccgctccacaaagacaatcctaaatgctgccaaccaggtaattgaaaacaat
gaaggtagaaagagtaaaagattatggactgcaaacgacgaaggatgtctaataaaaatt
ttcagcggagcaaatgaacatgaagaagctaatttcatagtagataaaataaaagaagta
tctgaaaaagaagacaaaaaattatcagactttgctattttatatagaacaaatgctcag
tcacgtgtaatagaagaagcatttttaaaagctaatataccttataaaatagttggagga
cataaattctatgatagaaaagaaataaaggatatcatagcttatttaagattaattcag
aaccctgtagacaattatgcatttaaaaggatagtaaatgtgccaaaaagagggttaggc
aagacaacattagatagattagagcaatacagtataaaaaaagaagacagtatatttgga
gcaatgctagaatgtgatgaaataccgggacttactccaagagctaaagacagcttgaac
tctttttctttattgataagaaaatttatggccatgaaagagctatttactgtaacggag
ttaatagaaaatataatagactcaattggatatattgaggaaatacaacaggaggaaact
gtacaggcagagtctagaatagagaatattaaagagtttttatcagtagctgtgaatttt
gaagaaaccagtgaagacaaaactctcgaagggtttcttgcaaatatctcacttctttca
gatttagataaaacagatgaaaatgatagagacacagttacaatgatgactctgcatagt
gcaaagggacttgaatttccagtagtttttatgaccggaatggaagaaagtctatttcca
acttctagagcatattttagtgaggacgatatggaagaggaaagaaggctatgctacgta
ggcatcacaagagcagaggaaatgttatttatgacacgtgccttcagtcgtatgctttat
ggtaaaacaggtgttaactccatgtctagatttttaagagaagtacccgatgagtttatt
gaggatttaaatgaaagcgaagcaagtactgtatctacgatacctactaagataaatgtt
aatacttcttcgaaatactttgcaggatatactgtagaaaataccagaaaagctcctgtg
gtttcaaatctagacgttaagcctgggacgaaggttaaccataaggcttggggtataggt
acagtagttcaggtcaaagatttagataatgataaagagttaataattgcatttaatagt
cagggtataaagaaattgatgctttcatttgcacctatagaaattttatag
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