Proteiniborus sp. MB09-C3: QO263_18475
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Entry
QO263_18475 CDS
T09105
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
prom
Proteiniborus sp. MB09-C3
Pathway
prom03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
prom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
QO263_18475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prom03400
]
QO263_18475
Enzymes [BR:
prom01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
QO263_18475
DNA repair and recombination proteins [BR:
prom03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QO263_18475
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
HHH_5
Viral_helicase1
AAA_11
HHH
PIF1
AAA_22
nSTAND3
IMS_HHH
SLFN-g3_helicase
T2SSE
Herpes_Helicase
UvrD-helicase
DEAD
NTPase_1
NAT10_TcmA_helicase
HHH_2
NPHP3_N
DNA_pol_lambd_f
AAA
HerA_C
AAA_16
MeaB
UvrD_C
AAA_28
MutL_C
RecR_HhH
SRP54
5_3_exonuc
KTI12
RsgA_GTPase
MobB
HRDC
TrwB_AAD_bind
ABC_tran
SKI
AAA_14
CbiA
AAA_5
ResIII
ATP_bind_1
Motif
Other DBs
NCBI-ProteinID:
WIV12057
LinkDB
All DBs
Position
complement(3780110..3782341)
Genome browser
AA seq
743 aa
AA seq
DB search
MVTLQGTIEEIIFHNESNGYTIAILETDDDVVTIVGYIPIISLGETLNVQGEWTYHVNYG
QQLKVDTYSTVVPATLNGIVKYLSSGLIPGIGPKTAEKIAEKFGLDSLDILQYNPDRLKE
IPGLGEKKIEKIAEAFIEQRELRDIMIFLQNYGIGPNYGIRIYKKYGNEAIIKIKENPYR
LSEDIVGIGFKMADKIAQSMGVDFRSPYRINAGIKFRLMEFSAEGHTYAPQELLIRLTSE
LLNVERELVADGIKSLAIKQEIQLERLDGDEICVYYMPFYFAETNVCKKIIELSRSEVKS
LDIDLNRVIEDIEEEDNIKFAEKQKEAIRQAIENGLLVVTGGPGTGKTTTINSIIKLFEK
KGLTVTLAAPTGRAAKRMSEASGKEAKTIHRLLEYGFVDDELGMDFAKDEGTPIEADVVI
IDEMSMVDILLMNNLTKAILPGTRLILVGDTDQLPSVGAGNVLRDIINSKIVKVVKLDEI
FRQARESMIVVNAHRINKGEAPYLNVKDKDFFFMTRLSSESIVDTIIELSQERLPKFNGY
DPARDIQILTSMKKGDAGVNALNEKLQQALNPKHHLKAEKKSGDMLFRVGDKVMQIKNNY
KTKWILEEKDGSITEGEGVFNGDFGFITAIDEEESELTVLFDDNKEVIYSFNQLDELRLA
YATTIHKSQGSEFPVVIMPVCWGPPMLLTRNLLYTAITRAKELVVLVGMEKYMHMMINNN
RILKRYSGLDKRLLKVFDMMMRE
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atggtaactcttcaaggaactatcgaagaaatcatatttcataatgaatctaatggctac
accatcgcaatactagaaactgacgatgatgtagtcactattgtaggatatatacctatt
attagcttaggagaaactcttaatgtgcagggagagtggacgtatcatgtcaattatggt
caacagctaaaggtagatacatattctacagtagtacctgccacattaaatggtatagtc
aaatatctctcttctggcctcattccaggcataggacctaagacagcagaaaaaatagct
gaaaaatttggtttagattcattagatattctgcaatacaatccggatagactaaaagaa
atcccaggcttaggagaaaaaaagattgaaaagattgcagaggcatttattgaacaaaga
gaactgagagatataatgatattccttcaaaactacggcataggacctaattatggtata
agaatatataaaaaatatggaaatgaagccataataaaaataaaagaaaatccttacaga
ttatcagaggatatagttggtataggctttaaaatggcagataaaatagctcaaagcatg
ggagtagattttagatcaccatatagaataaatgctggaattaaatttaggctaatggag
ttttcggcagaaggccatacctatgcaccgcaggagctcttaataaggctgacatcagag
ctgctaaatgttgaaagggaactagtagctgatggaataaaaagtctagccataaagcag
gaaatacagctagaaagactagatggagatgaaatatgcgtatactatatgccattttat
tttgcggagactaatgtatgtaaaaaaataattgagctatcgagatcagaggtaaagagc
cttgatatagatttaaatagagtcatagaagatattgaagaagaggataatataaaattt
gcagaaaagcagaaggaagccataagacaggccatagaaaatggactattagtagttaca
ggggggccaggtaccggaaagactactactattaatagcattataaagctttttgaaaag
aagggccttacagttacattggctgcaccaactggaagagcagctaaaagaatgagtgaa
gcatcgggaaaagaagccaagaccatccatagacttctggaatatggctttgtagatgat
gagcttggaatggactttgcaaaagatgaaggaactccaatagaagctgatgttgtcatt
atagacgagatgtcaatggtagatatacttctaatgaacaatcttacaaaggcaatactg
ccgggaaccagactaatattagtaggtgatacagatcagctgccatcagtaggggcagga
aatgttcttagggatattataaatagtaaaattgttaaagtagtaaagctagacgagatt
tttagacaggcaagagaaagtatgatagtagtaaatgcacatagaatcaataaaggggaa
gctccatacctaaatgtaaaggataaggatttcttctttatgactagattaagctctgaa
agcatagtagatacaataattgaactaagccaagagagactgcctaaatttaacggatac
gatccagctagagatattcagatacttacatctatgaaaaaaggagatgcaggtgtaaat
gcattaaatgaaaagctccagcaagcattaaatcctaagcatcacctaaaagcagaaaag
aaatctggagacatgctgtttagagtaggggataaggtaatgcagataaagaacaattat
aagactaaatggattcttgaggaaaaggatggaagcattactgaaggtgaaggagttttt
aatggagattttggatttataactgctattgatgaagaggaaagcgagcttacagtacta
tttgacgataataaggaagtaatatatagctttaatcagcttgatgagctaagacttgcc
tatgctacaacaatccataaaagccaaggaagtgaatttcctgtagtgatcatgccagta
tgctgggggcctcctatgcttcttacaagaaatctgctatatacagctattacaagagca
aaagagttagtagtattagtaggcatggaaaaatatatgcatatgatgataaataataat
agaatattaaaaaggtactcaggtcttgataaaagacttttgaaagtcttcgacatgatg
atgagggagtaa
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