Proteus sp. NMG38-2: LG402_00950
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Entry
LG402_00950 CDS
T11216
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
pron Proteus sp. NMG38-2
Pathway
pron03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pron00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LG402_00950 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pron03019
]
LG402_00950 (rhlB)
Enzymes [BR:
pron01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LG402_00950 (rhlB)
Messenger RNA biogenesis [BR:
pron03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LG402_00950 (rhlB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
CMS1
AAA_22
PIN_9
CCDC138_C
Motif
Other DBs
NCBI-ProteinID:
UDN36263
LinkDB
All DBs
Position
complement(183652..184953)
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AA seq
433 aa
AA seq
DB search
MSKTYLTEKKFSDFALHPKVIEALEKKGFSNCTQIQALTLPITVKGQDIAGQAQTGTGKT
LAFLTSTFHYLLTHPAKEGHETNQPRALIMAPTRELAVQIYSDAKELAQNTGIKMGLAYG
GDGYDEQLKVLSNGVDIVIGTTGRLIDYVKQGHVNLSAIQVVVLDEADRMYDLGFIKDIR
WIFRRMPVAAERMNMLFSATLSYRVRELAFEQMNNPEYVEVEPEQKTGFSIKEELFYPSN
EEKMRLLQTLIEEEWPDRCIIFANTKHRCDDIWAHLAADGHRVGLLTGDVPQKKRLRILE
DFTQGNIDILVATDVAARGLHIPSVTHVFNYDLPDDCEDYVHRIGRTGRAGNSGNSISLA
CEEYALNLPAIETYIQHAIPVSKYNSDALLTDLPEPKRRHRPRQGQPRRNNAPSRNRGNN
TQRNNRNKRPSHP
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaacatatttgacagaaaagaagttttccgacttcgccttgcatccaaaagtg
atagaagcccttgagaaaaaagggttctctaattgtacacaaattcaggcattgacgtta
cctatcactgtgaaaggtcaagacattgccgggcaagcccaaacaggaacaggcaaaacg
ttggcgtttttaacctcaacgtttcattatcttttaacacaccctgctaaagaagggcat
gaaaccaatcaacctcgtgcacttattatggcgccaacacgcgaattagccgtgcagatc
tattctgatgctaaagagcttgcgcaaaatacagggataaaaatgggtctagcctacggt
ggcgatggctatgacgaacaactcaaagtattaagtaatggtgtcgatatcgttattggc
acaacaggtcgtttaattgactacgttaagcaaggtcatgtcaatcttagcgcaatccaa
gttgtggtacttgatgaagcggacagaatgtacgatcttggctttattaaagatattcgt
tggatcttccgtcgtatgccagttgcggctgaacgtatgaatatgttgttctctgcaaca
ctatcttaccgtgtaagggaacttgcctttgaacaaatgaataatcctgaatacgttgaa
gtagagcctgaacaaaaaacaggttttagtataaaagaagaacttttttatccttcaaat
gaagagaaaatgcgccttctccaaacgttaattgaagaagaatggcctgatcgctgtatc
atttttgccaatacaaaacatcgttgtgatgacatttgggcacaccttgccgcagatgga
caccgcgttggtttattaacaggtgatgttcctcagaaaaaacgtctacgtattttagaa
gattttacccaaggtaatattgatattctggttgccaccgatgttgcagctagaggtctt
catattccatctgtaacgcatgtttttaactatgatttacctgatgattgtgaagattat
gttcaccgcattggtagaacgggacgtgcgggtaatagtggcaattcaatcagtcttgca
tgtgaagaatatgctctaaatttacctgcaattgagacctatattcaacatgctattcct
gtgagtaaatataatagtgatgcgttattgacagatcttcctgagcctaaacgtcgtcac
cgtcctcgccaaggtcagccccgtcgcaataatgcgccgtcgcgaaaccgaggaaataat
actcaacgtaacaaccgaaataaacgcccgagtcatccataa
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