Proteus sp. NMG38-2: LG402_04105
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Entry
LG402_04105 CDS
T11216
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
pron Proteus sp. NMG38-2
Pathway
pron03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pron00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LG402_04105 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pron03019
]
LG402_04105 (pcnB)
Enzymes [BR:
pron01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
LG402_04105 (pcnB)
Messenger RNA biogenesis [BR:
pron03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LG402_04105 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
UDN36859
LinkDB
All DBs
Position
complement(880114..881724)
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AA seq
536 aa
AA seq
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MISRLIFLIIRIYYSRCHIFNRVAHFCRNLLGRQTTSSDTQPVASERPVTTASDRPIQET
QKPVRRRPAISADRPRKKKSNKEKANGSDLPMTVIPRDQHPISRKDISDNTLKVLYRLNN
SGFQAYLVGGGVRDLLLGKKPKDFDIATNATPEDVRRLFRNSRLVGRRFRLAHIMFGPEV
IEVATFRGSHEDHEISDNNQSQQAQSGMLLRDNIFGSIEEDAIRRDFTLNSLYYGVDDFA
VRDYVGGLADLKAGIIRLIGDPETRYREDPVRMLRAIRFASKLDMQIAPETAEPISRLAP
LLRNIPSARLFEESLKLLQTGQGYKTYKLMCRHQLLEPLFPLIASKMTEQHDTPMERMLD
QVLKNTDYRINKDMRVNPAFLFAAMLWYPLIEHAEKLVQESGLSYYDSFAMAMNDILDEQ
CRTIAIPKRITTMMRDIWQLQQRLPKRQGRRANKLLEHPKFRAAFDLLELRANVQRNPEL
EALASWWADFQASNNTQQRSMVSELGQAPVRRRPRPRKRPRHPSAKPASRQENNNE
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgattagccgcttaatttttttaattattagaatttattattcgaggtgtcatattttt
aatcgagtagcacatttctgccgtaatctgctagggcgacaaacaacgtcatcagacaca
caaccggtagcaagtgaaaggccagtcacaactgcatctgaccgaccaatacaagaaaca
cagaaacctgtgcgtcggcgtcctgctatatccgcagaccgtccccgtaagaaaaagagt
aataaagaaaaggcgaacgggagtgatttgccaatgacagtgatcccaagagatcaacac
ccaatttcacgtaaagacatcagtgacaatacattaaaagtgctttatcgcctaaataat
tctggttttcaggcttatttagtcggtggtggtgtccgtgacttattactgggaaaaaaa
ccaaaagattttgatattgccacaaatgcaacccctgaggatgtacgtcgattattccgc
aacagtcgtttagtcggtcgtcgtttccgccttgcacatatcatgtttggccctgaagtg
attgaagtggctactttccgtggctctcatgaagatcatgaaatttcagacaacaaccaa
tcacagcaagcacaaagcggcatgttactgcgcgacaatatttttggctccattgaagaa
gatgccattcgtcgtgactttacattaaacagcctttattacggtgttgatgattttgct
gtacgtgattacgttggcggtttagcggatcttaaagcaggcattattcgtttaattggc
gatcctgaaacgcgttatcgcgaagatcccgtcagaatgcttagagccattcgctttgcc
agcaaattggatatgcaaattgcgcctgaaaccgcagagccaattagcagactcgcccct
ttattacgtaatattccatcggctcgcctttttgaagagtcactaaaattattacaaaca
gggcaaggctataaaacatacaaactcatgtgtcgccatcagttgcttgagccgttgttc
ccgctaatagcatcaaaaatgacagaacaacatgatacgccgatggagagaatgctggat
caagttctcaaaaatacagactatcgtattaataaagatatgcgtgttaatccggcattc
ttatttgcggcaatgttgtggtatccattaatcgaacatgcagagaaattagtccaagaa
agtggtctttcttactatgattctttcgctatggcgatgaatgatattttagatgaacaa
tgtcgtacgattgcaattccaaaacgtattaccaccatgatgcgtgatatctggcaatta
cagcaacgtttacctaaacgccaaggtcgtcgtgccaataaactgcttgagcaccctaaa
ttccgtgcagcgttcgacttactggaattacgtgccaatgtacaacgtaatccagaactt
gaagcgttagcgagttggtgggcagatttccaagcctctaacaatacacaacaacgctca
atggtctcagaattaggtcaagcaccggttcgtagacgccctcgtccacgtaagcgtcct
cgccacccaagtgcaaagccagcatcaagacaagagaacaataatgagtaa
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